Here is a list of all class members with links to the classes they belong to:

- b -

• b : Atom
• B() : B
• b : Base , basic::sampling::orientations::Triple , bbbb::B , Bond , outer::inner2 , rgb , S
• B() : Spacegroup , ui::network::B
• b1 : OctreeIdx
• b1_ : CoupledFunc
• b2 : OctreeIdx
• b2_ : CoupledFunc
• b3 : OctreeIdx
• B3AADihedralGrabber() : B3AADihedralGrabber
• b4 : OctreeIdx , S
• b5 : OctreeIdx
• b6 : OctreeIdx
• b7 : OctreeIdx
• b8 : OctreeIdx
• b9 : OctreeIdx
• b_ : numeric::linear_algebra::EllipseParameters , ObjexxFCL::byte , ObjexxFCL::ubyte , Spacegroup
• b_is_set_ : basic::svd::SVD_Solver
• B_not_binded : S
• back() : ObjexxFCL::CArray< T > , ObjexxFCL::CArrayP< T > , ObjexxFCL::Chunk< T > , ObjexxFCL::ChunkVector< T > , utility::keys::ClassKeyVector< K, T, C > , utility::keys::KeyVector< K, T > , utility::keys::SmallKeyVector< K, T >
• back_edge() : RerootRestypeVisitor , utility::graph::RingEdgeAnnotationVisitor< Graph, EdgeMap, PathMap >
• back_end : ui::network::IndexPack
• back_ends() : ui::network::Bowman
• back_ends_ : ui::network::Bowman
• back_ends_changed() : ui::network::Bowman
• backbone_dihedral_ : PairScore
• backbone_dihedral_score_ : PairScore
• backbone_minimization() : MinPackMin
• backbone_weight_ : NativeEnsemble
• BackEnds : ui::network::Bowman
• background_color : detail::basic_data< T > , text_style
• backoff : Hit
• backrub_mover() : HemeBindingMover
• backrub_mover_ : HemeBindingMover
• BacksideHbondFinderMover() : BacksideHbondFinderMover
• backsideO_His_ : HbondZinc
• backspace_pressed() : ui::task::FileTableWatcher
• backspace_pressed_on_files() : ui::task::TaskSubmit
• bad() : numeric::xyzTransform< T > , utility::io::icstream , utility::io::irstream , utility::io::izstream , utility::io::ocstream , utility::io::orstream , utility::io::ozstream
• BAD_RT6() : numeric::xyzTransform< T >
• BAD_XFORM() : numeric::xyzTransform< T >
• badfast() : numeric::xyzTransform< T >
• BadFileFormatException() : ui::util::BadFileFormatException
• balanced_apply() : ClosureMover
• ball() : numeric::geometry::hashing::xyzStripeHash
• ball_radius_ : numeric::geometry::hashing::MinimalClashHash
• bare_name() : utility::file::FileName
• barrel_ : DomainDescription
• base : arls_impl.DockingFile , detail::arg_formatter< OutputIt, Char > , detail::buffer_appender< T > , detail::compile_parse_context< Char, ErrorHandler > , detail::truncating_iterator_base< OutputIt > , MatchSet
• Base : ObjexxFCL::FArray1< T > , ObjexxFCL::FArray1A< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2< T > , ObjexxFCL::FArray2A< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::FArray< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• base : printf_arg_formatter< OutputIt, Char > , utility::file::FileName
• Base() : utility::py::Base
• base_ : utility::file::FileName
• base_filename_ : zinc_stats::ZincStatisticGenerator
• base_scale_ : InteractionGraphPerformanceBenchmark
• base_scale_factor_ : ScoreEachBenchmark
• base_type() : utility::tag::XMLSchemaRestriction
• base_type_ : utility::tag::XMLSchemaRestriction
• BaseB() : BaseB
• BaseC() : BaseC
• BaseD() : BaseD
• basic_cstring_view() : basic_cstring_view< Char >
• basic_format_arg() : basic_format_arg< Context >
• basic_format_args() : basic_format_args< Context > , wformat_args
• basic_format_args< Context > : basic_format_arg< Context > , dynamic_format_arg_store< Context > , format_arg_store< Context, Args >
• basic_format_context() : basic_format_context< OutputIt, Char >
• basic_format_parse_context() : basic_format_parse_context< Char, ErrorHandler >
• basic_format_specs() : basic_format_specs< Char >
• basic_init_ : RosettaBackend , RosettaJob
• basic_memory_buffer() : basic_memory_buffer< T, SIZE, Allocator >
• basic_mpi_ostream() : utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_mpi_ostreambase() : utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_mpi_streambuf() : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_otstream() : basic::basic_otstream< CharT, Traits >
• basic_printf_context() : basic_printf_context< OutputIt, Char >
• basic_streambuf_type : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_string_view() : basic_string_view< Char >
• basic_tstringbuf() : basic::basic_otstream< CharT, Traits >::basic_tstringbuf< _CharT, _Traits >
• basic_unzip_streambuf() : zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_zip_istream() : zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_zip_istreambase() : zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_zip_ostream() : zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_zip_ostreambase() : zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
• basic_zip_streambuf() : zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• BasicDataCache() : basic::datacache::BasicDataCache
• batch_ids_ : basic::mpi::DbMoverMessageListener
• BatchList : CloudArchiveManagerWrapper
• bb_hbonds_ : Features
• bb_rmsd() : ExposedStrandMover
• bb_score() : ExposedStrandMover , HDmakerMover , InterfaceStrandFinderMover
• bbbb::cccc::operator<< : bbbb::B
• BBG_Cyclic_Mover() : BBG_Cyclic_Mover
• bbgmover_ : CenRotCanonicalMover
• bbin_A_counts_ : JDmover
• bbin_B_counts_ : JDmover
• bbin_E_counts_ : JDmover
• bbin_G_counts_ : JDmover
• bbin_O_counts_ : JDmover
• bbl_ : ClashCheck , MatchSet
• BBMover() : BBMover
• bbu_ : ClashCheck
• be_shrunk() : Solver , Solver_NU
• beat_intervals() : pyrosetta.tests.distributed.test_gil.HeartBeat
• beats() : pyrosetta.tests.distributed.test_gil.HeartBeat
• been_accessed() : utility::options::Option
• been_accessed_ : utility::options::Option
• begin : arg_join< It, Sentinel, Char > , basic::datacache::ConstDataMap , basic::datacache::DataMap , basic::datacache::WriteableCacheableMap , basic_format_parse_context< Char, ErrorHandler > , basic_string_view< Char > , detail::ansi_color_escape< Char > , detail::buffer< T > , detail::format_decimal_result< Iterator > , formatter< std::chrono::duration< Rep, Period >, Char >::parse_range , numeric::geometry::hashing::xyzStripeHash , numeric::kdtree::KDPointList , numeric::MathMatrix< T > , numeric::MathVector< T > , ObjexxFCL::CArray< T > , ObjexxFCL::CArrayP< T > , ui::network::Bowman , utility::BitSet< B > , utility::BitVector< B > , utility::fixedsizearray0< T, S > , utility::fixedsizearray1< T, S > , utility::FixedSizeLexicographicalIterator< S > , utility::graph::DirectedEdgeList , utility::graph::EdgeList , utility::keys::ClassKeyMap< K, T, C > , utility::keys::ClassKeyVector< K, T, C > , utility::keys::KeyLookup< K > , utility::keys::KeyVector< K, T > , utility::keys::lookup::begin< K > , utility::keys::SmallKeyMap< K, T > , utility::keys::SmallKeyVector< K, T > , utility::LexicographicalIterator , utility::options::VectorOption_T_< K, T > , utility::OrderedTuple< T > , utility::SimpleRange1
• begin_ : utility::json_spirit::Multi_pass_iters< Istream_type >
• begin_array() : utility::json_spirit::Semantic_actions< Value_type, Iter_type >
• begin_compound() : utility::json_spirit::Semantic_actions< Value_type, Iter_type >
• begin_obj() : utility::json_spirit::Semantic_actions< Value_type, Iter_type >
• begin_transaction() : utility::sql_database::session
• Benchmark() : Benchmark
• benchtype_ : FastRelaxPerformanceBenchmark , InteractionGraphPerformanceBenchmark
• best_ddG_ : zinc1_homodimer_design
• best_mutations_from_probabilities_metric : pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor
• best_pose_ : zinc1_homodimer_design
• best_rmsd_values_ : ExposedStrandMover
• beta() : Spacegroup
• beta_ : Spacegroup
• beta_length_ : ExposedStrandMover , InterfaceStrandFinderMover
• BetaAlphaBetaMotif : Foldptn , PickBAB
• BetaAlphaBetaMotifs : Foldptn , PickBAB
• BetaAlphaBetaMotifSet : Foldptn , PickBAB
• bfactor() : HBondReporter
• bfactors_ : SimulateCryoMover
• bg : text_style
• bgBlack : basic::Tracer , basic::TracerImpl
• bgBlue : basic::Tracer , basic::TracerImpl
• bgCyan : basic::Tracer , basic::TracerImpl
• bgGreen : basic::Tracer , basic::TracerImpl
• bgMagenta : basic::Tracer , basic::TracerImpl
• bgRed : basic::Tracer , basic::TracerImpl
• bgWhite : basic::Tracer , basic::TracerImpl
• bgYellow : basic::Tracer , basic::TracerImpl
• biased_rama_perturb() : ClosureMover
• BicubicSpline() : numeric::interpolation::spline::BicubicSpline
• big_divisor : detail::dragonbox::float_info< double > , detail::dragonbox::float_info< float >
• bigint() : detail::bigint
• bigit : detail::bigint
• bigit_bits : detail::bigint
• bigits_ : detail::bigint
• bigits_capacity : detail::bigint
• bin6() : numeric::geometry::hashing::SixDCoordinateBinner
• bin_center_point() : numeric::geometry::hashing::SixDCoordinateBinner
• bin_from_index() : numeric::geometry::hashing::SixDCoordinateBinner
• bin_index() : numeric::geometry::hashing::SixDCoordinateBinner , numeric::MultiDimensionalHistogram
• bin_number() : numeric::interpolation::Histogram< X, Y >
• bin_placement() : numeric::interpolation::Histogram< X, Y >
• bin_placement_ : numeric::interpolation::Histogram< X, Y >
• bin_width() : numeric::interpolation::InterpolatedPotential< N >
• bin_width_ : numeric::interpolation::InterpolatedPotential< N >
• bin_widths() : numeric::geometry::hashing::SixDCoordinateBinner
• bin_widths_ : numeric::geometry::hashing::SixDCoordinateBinner
• binary32 : detail::float_specs
• BinaryExpression() : numeric::expression_parser::BinaryExpression
• bind() : binder::Binder , binder::ClassBinder , binder::Context , binder::EnumBinder , binder::FunctionBinder
• bind_data() : basic::database::insert_statement_generator::RowData< T > , basic::database::insert_statement_generator::RowDataBase
• bind_nested_classes() : binder::ClassBinder
• bind_repr() : binder::ClassBinder
• bind_row_data() : basic::database::insert_statement_generator::InsertGenerator
• bind_with() : binder::ClassBinder
• bindable() : binder::Binder , binder::ClassBinder , binder::EnumBinder , binder::FunctionBinder
• binded : binder::Context
• binder_for_namespaces() : binder::Config
• binder_for_namespaces_ : binder::Config
• BinderASTConsumer() : BinderASTConsumer
• binders() : binder::Config , binder::Context
• binders_ : binder::Config
• BinderVisitor() : BinderVisitor
• binding_requested() : binder::Binder
• binding_requested_ : binder::Binder
• BinPlacement : numeric::interpolation::Histogram< X, Y >
• binw() : NonceHistogram
• binw_ : NonceHistogram
• Bit : utility::BitSet< B > , utility::BitVector< B >
• Bite() : ObjexxFCL::format::Bite< T >
• Bits : utility::BitSet< B > , utility::BitVector< B >
• bits_ : utility::BitSet< B > , utility::BitVector< B >
• BitSet() : utility::BitSet< B >
• BitVector() : utility::BitVector< B >
• Black : basic::Tracer , basic::TracerImpl
• black_listed_files_ : utility::Inline_File_Provider
• black_target() : utility::graph::null_bfs_prune_visitor
• blackhole_ : detail::truncating_iterator< OutputIt, std::false_type >
• block() : utility::signals::Link , utility::signals::SignalHub< ReturnType, Signal >
• block1_id : calculation_data_for_one_block_pair
• block2_id : calculation_data_for_one_block_pair
• block_size() : utility::graph::ArrayPool< T >
• block_size_ : utility::graph::ArrayPool< T >
• blocked() : utility::signals::Link , utility::signals::LinkUnit , utility::signals::SignalHub< ReturnType, Signal >
• blocked_ : utility::signals::SignalHub< ReturnType, Signal >
• Blue : basic::Tracer , basic::TracerImpl
• BluePrint : Foldptn , PairDistance , PickBAB
• blueprint_ : PairDistance
• BluePrintOP : Foldptn , PairDistance , PickBAB
• bMPI_reroute_stream_ : utility::io::ozstream
• body : options.KeepSameFile
• BodyPosition() : numeric::BodyPosition< T >
• BodyPosition< T > : numeric::Quaternion< T >
• Bola() : Bola
• Bold : basic::Tracer , basic::TracerImpl
• Bond() : Bond
• bondedN() : Tet4HMatchAligner
• BondedRNA_Mover() : BondedRNA_Mover
• bonus_ : SameResidueTypeConstraint
• bool_from_str() : pyrosetta.bindings.scores.serialization.PoseScoreSerializerBase
• bool_value : detail::value< Context >
• boolean_vectors_ : utility::options::OptionCollection
• BooleanExpressionCreator() : numeric::expression_parser::BooleanExpressionCreator
• BooleanExpressionScanner() : numeric::expression_parser::BooleanExpressionScanner
• BooleanOption() : utility::options::BooleanOption
• BooleanOptionKey() : utility::options::BooleanOptionKey
• Booleans : utility::options::OptionCollection
• booleans_ : utility::options::OptionCollection
• BooleanVectorOption() : utility::options::BooleanVectorOption
• BooleanVectorOptionKey() : utility::options::BooleanVectorOptionKey
• BooleanVectors : utility::options::OptionCollection
• boost::iterator_core_access : HBondedPairIterator
• border_ : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::CubicSpline , numeric::interpolation::spline::PolycubicSpline< N > , numeric::interpolation::spline::PolycubicSpline< 1 > , numeric::interpolation::spline::PolycubicSpline< 2 > , numeric::interpolation::spline::TricubicSpline
• BorderFlag : numeric::VoxelGrid< T >
• BorderFlags_ : numeric::VoxelGrid< T >
• Bound() : utility::Bound< T >
• boundary_functions_ : numeric::interpolation::spline::SplineGenerator
• bounded() : ObjexxFCL::DynamicIndexRange , ObjexxFCL::IndexRange
• bounded_value() : ObjexxFCL::IndexRange
• bounding_box() : numeric::geometry::hashing::SixDCoordinateBinner
• bounding_box_ : numeric::geometry::hashing::SixDCoordinateBinner
• bounding_volume_from_index() : numeric::geometry::hashing::SixDCoordinateBinner
• BoundingBox() : numeric::geometry::BoundingBox< T > , numeric::geometry::hashing::SixDCoordinateBinner
• bounds() : numeric::kdtree::KDTree
• Bounds : numeric::VoxelArray< _Float, _Value >
• bounds_ : numeric::kdtree::KDTree
• bounds_check() : utility::graph::Array0< T >
• bowman() : ui::network::Bowman
• Bowman() : ui::network::Bowman
• bowman_model_ : ui::network::BowmanView
• bowman_thread : ui::network::B
• bowman_thread_ : ui::network::Bowman
• BowmanModel() : ui::network::BowmanModel
• BowmanThread() : ui::network::BowmanThread
• BowmanView() : ui::network::BowmanView
• Box_ : numeric::VoxelGrid< T >
• box_size_multiplier_ : SimulateCryoMover
• branch_it_type : GlycanClashCheckMover
• branch_point_resnums_ : GlycanClashCheckMover
• branch_residues_ : GlycanClashCheckMover
• branches_ : GlycanClashCheckMover
• breadth_move : SamplingManager
• breadth_move_ : BreadthMover
• breadth_mover : SamplingManager
• BreadthMover() : BreadthMover
• Breathe() : Dog< I > , Mammal< I > , PyCallBack_Dog_1_t , PyCallBack_Mammal_1_t
• bRelax_ : protocols::abinitio::JumpSpecificAbrelax
• BruteFunGroupTK() : BruteFunGroupTK
• BruteRotSel() : BruteRotSel
• buf() : basic::PyTracer , detail::fixed_handler , PyMOL-Rosetta-relay-client.PR_UDPServer , PyMOL-RosettaServer.PR_UDPServer , pyrosetta.network.rosetta_udp_to_tcp_bridge.PR_UDPServer , pyrosetta.PyMOLRosettaServer.PR_UDPServer
• buf_ : basic::PyTracer
• buffer : detail::ansi_color_escape< Char > , detail::buffer< T > , job_manager.CommandRunner , SVR_Q , utility::signals::BufferedSignalHub< ReturnType, Signal >
• Buffer : utility::signals::BufferedSignalHub< ReturnType, Signal >
• buffer_ : detail::formatbuf< Char > , detail::utf8_to_utf16 , format_int , GetURLHandler , utility::signals::BufferedSignalHub< ReturnType, Signal >
• buffer_appender() : detail::buffer_appender< T >
• buffer_protocols : binder::Config
• buffer_size : detail::counting_buffer< T > , detail::iterator_buffer< OutputIt, T, Traits > , format_int , utility::io::ozstream , utility::signals::BufferedSignalHub< ReturnType, Signal >
• buffer_size_ : utility::io::ozstream
• buffer_traits() : detail::buffer_traits
• buffered_file() : buffered_file
• BufferedSignalHub() : utility::signals::BufferedSignalHub< ReturnType, Signal >
• buffering() : utility::signals::BufferedSignalHub< ReturnType, Signal >
• buffering_ : utility::signals::BufferedSignalHub< ReturnType, Signal >
• build_acceptor_frame() : apps::pilot::momeara::HBondConformation
• build_ala_mover_ : HDdesignMover
• build_AtomID_vec() : HECTMover
• build_donor_frame() : apps::pilot::momeara::HBondConformation
• build_residue() : apps::pilot::momeara::HBondConformation
• build_rotamers() : HbondZinc
• BuildFullModel() : BuildFullModel
• BuildManager : SwapElementsMover1 , SwapElementsMover2
• bundle_index : node_data
• bunsat_acc_nbr_residue_check() : BuriedUnsatPolarsFinder
• bunsat_donor_nbr_residue_check() : BuriedUnsatPolarsFinder
• bunsats_thorough_check() : BuriedUnsatPolarsFinder
• burial_cutoff_ : CalcsTestMover
• BuriedUnsatisfiedPolars_ : CalcsTestMover
• BuriedUnsatPolarsFinder() : BuriedUnsatPolarsFinder
• bus : ui::network::B
• bus_ : ui::network::BowmanThread
• bw : numeric::fourier::SHT , numeric::fourier::SO3coeffs
• by_aa() : myspace::DataClass
• by_aa_ : myspace::DataClass
• by_cover_ : basic::sampling::orientations::QuaternionGridManager
• by_radius_ : basic::sampling::orientations::QuaternionGridManager
• by_size_ : basic::sampling::orientations::QuaternionGridManager
• byte() : ObjexxFCL::byte
• byte_allocator_type : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• byte_buffer_type : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• byte_for_element() : utility::DenseBoolMap< NUM_ELEMS, BASE_INDEX >
• byte_type : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• byte_vector_type : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• bytes() : bytes