- i -

• I() : numeric::BodyPosition< T > , numeric::Quaternion< T > , numeric::xyzMatrix< T > , ObjexxFCL::FArray1< T > , ObjexxFCL::FArray1A< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::KeyFArray1D< T >
• I1() : ObjexxFCL::FArray1< T > , ObjexxFCL::FArray1A< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2< T > , ObjexxFCL::FArray2A< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• I2() : ObjexxFCL::FArray2< T > , ObjexxFCL::FArray2A< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• I3() : ObjexxFCL::FArray3< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• I4() : ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• I5() : ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• I6() : ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray6D< T >
• i_last_chunk() : ObjexxFCL::ChunkVector< T >
• IAMover() : IAMover
• icstream() : utility::io::icstream
• id() : binder::Binder , binder::ClassBinder , binder::EnumBinder , binder::FunctionBinder , numeric::ClusteringTreeNode , utility::keys::AutoKey< O, S, C > , utility::keys::Key , utility::keys::UserKey< O, S, C > , utility::keys::VariantKey< K > , utility::options::Option , utility::options::ScalarOption_T_< K, T > , utility::options::VariantOption< O > , utility::options::VectorOption_T_< K, T >
• identifier() : utility::keys::AutoKey< O, S, C > , utility::keys::Key , utility::keys::UserKey< O, S, C > , utility::keys::VariantKey< K > , utility::options::Option , utility::options::ScalarOption_T_< K, T > , utility::options::VariantOption< O > , utility::options::VectorOption_T_< K, T >
• IdentifyCDRClusters() : IdentifyCDRClusters
• identity() : numeric::BodyPosition< T > , numeric::Quaternion< T > , numeric::xyzMatrix< T > , numeric::xyzTransform< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::KeyFArray2D< T >
• identity_protocol() : pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest
• idx_to_euler() : numeric::fourier::SHT
• idx_to_rot() : numeric::fourier::SHT
• iface_check() : MatchSet
• ifc() : FunGroupTK
• ifft2dslice() : CrystFFTDock
• ignore() : utility::io::icstream , utility::io::irstream , utility::io::izstream
• in() : basic::TracerImpl
• in_list() : utility::list_element< T >
• in_place_list() : utility::in_place_list< T >
• inactive() : utility::Bound< T > , utility::keys::ClassKeyMap< K, T, C > , utility::keys::ClassKeyVector< K, T, C > , utility::keys::KeyVector< K, T > , utility::keys::SmallKeyMap< K, T > , utility::keys::SmallKeyVector< K, T >
• inactive_error() : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• include_citation_info() : utility::tag::XMLSchemaDefinition
• includes() : binder::IncludeSet
• includes_code() : binder::Config
• incoming_edge_list_begin() : utility::graph::DirectedNode
• incoming_edge_list_end() : utility::graph::DirectedNode
• incoming_message_queue_is_empty() : utility::SimulateMPI
• increase_count() : numeric::histograms::TwoDHistogram< key1, key2 >
• increase_coval() : utility::heap
• increment() : HBondedPairIterator , pyrosetta.distributed.utility.log.ProgressLogger
• increment_indentation() : numeric::expression_parser::ASTPrinter
• increment_int() : testers::test_my_struct
• increment_nread_limit() : utility::io::FileContentsMap
• indegree() : utility::graph::DirectedNode
• indent() : utility::json_spirit::Generator< Value_type, Ostream_type >
• indent_line() : numeric::expression_parser::ASTPrinter
• Index() : basic::database::schema_generator::Index
• index() : ObjexxFCL::FArray1< T > , ObjexxFCL::FArray1A< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2< T > , ObjexxFCL::FArray2A< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T > , ui::network::BowmanModel , ui::task::ProjectModel , ui::util::TreeNodeModel< T > , utility::FixedSizeLexicographicalIterator< S > , utility::keys::AutoKey< O, S, C > , utility::keys::ClassKeyMap< K, T, C > , utility::keys::ClassKeyVector< K, T, C > , utility::keys::Key , utility::keys::SmallKeyMap< K, T > , utility::keys::SmallKeyVector< K, T > , utility::keys::UserKey< O, S, C > , utility::LexicographicalIterator , utility::libsvm::Svm_node_rosetta , utility::SimulateMPIMessage , utility::vector1< T, A > , utility::vector1< bool, A > , VallIndex
• index_for_val() : utility::heap
• index_of() : utility::vectorL< L, T, A >
• index_of_next_message() : utility::SimulateMPI
• index_to_file() : ui::task::TaskView
• IndexPack() : ui::network::IndexPack
• IndexRange() : ObjexxFCL::IndexRange
• indicate_required_context_graphs() : CapriTotalEnergy , CapriTwoBodyEnergy , MyCI1B , test.T850_SubClassing.MyNewCI1B
• indices_to_center() : numeric::VoxelArray< _Float, _Value >
• info() : numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
• init() : Arch , basic::database::schema_generator::Schema , basic::TracerImpl , CenRotDockingMover , CenRotRBRelaxMover , ConstraintConfig , DesignGlycansProtocol , DockGlycansProtocol , GlycanClashCheckMover , GlycomutagenesisProtocol , MatchBase , MatchSet , myspace::GraftTester , numeric::fourier::SHT , numeric::fourier::SO3coeffs , numeric::geometry::hashing::MinimalClashHash , numeric::geometry::hashing::SixDOffsetTree , numeric::geometry::hashing::xyzStripeHash , numeric::geometry::hashing::xyzStripeHashWithMeta< T > , system_error , TCDock , ui::network::Argument , ui::network::BooleanArgument , ui::network::FloatArgument , ui::network::IntegerArgument , ui::network::PathArgument , ui::network::StringArgument
• init_by_array() : numeric::random::mt19937_RG
• init_clash_check() : ClashCheck , MatchSet
• init_from_cmd() : MPDomainAssembly , MPInterfaceStatistics , TestQuickRelaxMover
• init_from_local_file() : ui::task::File
• init_on_new_input() : AbInitio_MPI , FloppyTailMover , HECTAllMover , HECTMover , HECTUBQMover , UBQ_E2Mover , UBQ_GTPase_disulfide_Mover
• init_options() : abbinding , PhDocking , PhProtocol , SampleTiltProtocol
• init_private_data_() : SequenceProfileDB
• init_static_inputs() : utility::Inline_File_Provider
• initial_mask() : numeric::random::mt19937_RG
• initial_value() : ObjexxFCL::FArrayTraits< T > , ObjexxFCL::FArrayTraits< numeric::xyzVector< T > > , ObjexxFCL::TypeTraits< T >
• initialize() : CountContact , numeric::coordinate_fitting::FlatLookup< QueryType, EntryType, Real > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T > , PBPotentialMover
• Initialize() : utility::graph::RingDetection< Graph >
• initialize_constraint_forest() : protocols::abinitio::JumpSpecificAbrelax
• initialize_frag_assignment() : FragMonteCarlo
• initialize_from_commandline() : basic::resource_manager::ResourceManager
• initialize_from_options() : basic::random::RandomGeneratorSettings , HemeBindingMover , MetalSiteFinderMover , zinc_stats::ZincStatisticGenerator
• initialize_from_string() : basic::citation_manager::Citation
• initialize_pose() : ChallengeMover
• initialize_simulation() : utility::SimulateMPI
• initialize_template_structures() : ChallengeMover
• initialize_vertex() : RerootRestypeVisitor , utility::graph::null_bfs_prune_visitor
• initialized() : numeric::random::RandomGenerator , ObjexxFCL::Dimension , ObjexxFCL::DimensionExpression , ObjexxFCL::DimensionExpressionCon , ObjexxFCL::DimensionExpressionCube , ObjexxFCL::DimensionExpressionDiv , ObjexxFCL::DimensionExpressionMax , ObjexxFCL::DimensionExpressionMin , ObjexxFCL::DimensionExpressionMul , ObjexxFCL::DimensionExpressionPow , ObjexxFCL::DimensionExpressionRef , ObjexxFCL::DimensionExpressionSquare , ObjexxFCL::DimensionExpressionSub , ObjexxFCL::DimensionExpressionSum , ObjexxFCL::DynamicIndexRange , ObjexxFCL::IndexRange
• initializeGL() : MainWindow , ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget
• initializer() : ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• initializer_active() : ObjexxFCL::FArray1A< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2A< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::FArray< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• initializer_clear() : ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• InitializerSentinel() : ObjexxFCL::internal::InitializerSentinel
• initials() : basic::citation_manager::AuthorNames
• initTestCase() : FunctorTest , NodeTest
• InjectorMover() : InjectorMover
• Inline_File_Provider_Hook() : utility::Inline_File_Provider_Hook
• inner_product() : numeric::alignment::QCPKernel< Real > , numeric::xyzTriple< T > , numeric::xyzVector< T >
• inorder_range_list() : numeric::DietNode< T >
• input_id_from_resource_tag() : basic::resource_manager::ResourceManager
• input_pdb() : InterfaceDDGBindInnerJob
• input_source() : InterfaceDDGBindJobInputter
• insert() : basic::datacache::WriteableCacheableMap , numeric::DietNode< T > , numeric::DiscreteIntervalEncodingTree< T > , numeric::geometry::hashing::SixDOffsetTree , numeric::kdtree::KDPointList , utility::graph::DirectedEdgeList , utility::graph::EdgeList , utility::keys::ClassKeyMap< K, T, C > , utility::keys::ClassKeyVector< K, T, C > , utility::keys::KeyLookup< K > , utility::keys::KeyVector< K, T > , utility::keys::SmallKeyMap< K, T > , utility::keys::SmallKeyVector< K, T >
• insert_after() : utility::graph::NegSpaceElement< T >
• insert_as_observer() : ObjexxFCL::Dimension , ObjexxFCL::DynamicIndexRange , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
• insert_as_observer_of() : ObjexxFCL::Dimension
• insert_data() : numeric::histograms::OneDHistogram< key1 > , numeric::histograms::TwoDHistogram< key1, key2 >
• insert_nonunique() : utility::keys::KeyLookup< K >
• insert_observer() : ObjexxFCL::DimensionExpression , ObjexxFCL::DimensionExpressionCon , ObjexxFCL::DimensionExpressionCube , ObjexxFCL::DimensionExpressionDiv , ObjexxFCL::DimensionExpressionMax , ObjexxFCL::DimensionExpressionMin , ObjexxFCL::DimensionExpressionMul , ObjexxFCL::DimensionExpressionPow , ObjexxFCL::DimensionExpressionRef , ObjexxFCL::DimensionExpressionSquare , ObjexxFCL::DimensionExpressionSub , ObjexxFCL::DimensionExpressionSum , ObjexxFCL::Observer , ObjexxFCL::ObserverMulti , ObjexxFCL::ObserverSingle
• insert_point() : numeric::RocCurve
• insert_template_frags() : protocols::abinitio::JumpSpecificAbrelax
• insert_vector() : Mode
• InsertGenerator() : basic::database::insert_statement_generator::InsertGenerator
• InsertObject() : numeric::VoxelGrid< T >
• InsertObjects() : numeric::VoxelGrid< T >
• instantiate_filters() : InstantiateModulesBenchmark
• instantiate_movers() : InstantiateModulesBenchmark
• instantiate_packer_palettes() : InstantiateModulesBenchmark
• instantiate_res_selectors() : InstantiateModulesBenchmark
• instantiate_reslvl_taskops() : InstantiateModulesBenchmark
• instantiate_simple_metrics() : InstantiateModulesBenchmark
• instantiate_taskops() : InstantiateModulesBenchmark
• InstantiateModulesBenchmark() : InstantiateModulesBenchmark
• int_of() : ObjexxFCL::Fstring
• int_type_checker() : detail::int_type_checker< ErrorHandler >
• int_writer() : detail::int_writer< OutputIt, Char, UInt >
• integer() : ObjexxFCL::DimensionExpression , ObjexxFCL::DimensionExpressionCon , ObjexxFCL::DimensionExpressionCube , ObjexxFCL::DimensionExpressionDiv , ObjexxFCL::DimensionExpressionMax , ObjexxFCL::DimensionExpressionMin , ObjexxFCL::DimensionExpressionMul , ObjexxFCL::DimensionExpressionPow , ObjexxFCL::DimensionExpressionRef , ObjexxFCL::DimensionExpressionSquare , ObjexxFCL::DimensionExpressionSub , ObjexxFCL::DimensionExpressionSum
• integer_msg() : utility::SimulateMPIMessage
• IntegerOption() : utility::options::IntegerOption
• IntegerOptionKey() : utility::options::IntegerOptionKey
• integers_msg() : utility::SimulateMPIMessage
• IntegerVectorOption() : utility::options::IntegerVectorOption
• IntegerVectorOptionKey() : utility::options::IntegerVectorOptionKey
• InteractionDistMinimizer() : InteractionDistMinimizer
• InteractionGraphPerformanceBenchmark() : InteractionGraphPerformanceBenchmark
• interface() : TwoChainInterface , TwoChainTenANeighbors
• interface_detection_dis() : protocols::antibody::design::AntibodyDesignMoverGenerator
• InterfaceDDGBindInnerJob() : InterfaceDDGBindInnerJob
• InterfaceDDGBindJobInputter() : InterfaceDDGBindJobInputter
• InterfaceDDGMutationTask() : InterfaceDDGMutationTask
• InterfaceFeaturesTests() : InterfaceFeaturesTests
• InterfaceHit() : InterfaceHit
• InterfaceHitDatabase() : InterfaceHitDatabase
• InterfaceStrandFinderMover() : InterfaceStrandFinderMover
• internal_add_edge() : utility::graph::LowMemNode
• internal_create_new_edge() : utility::graph::LowMemGraph< _LMNode, _LMEdge >
• internal_create_new_node() : utility::graph::LowMemGraph< _LMNode, _LMEdge >
• internal_delete_self() : utility::graph::LowMemEdge
• internal_deleted() : utility::graph::LowMemEdge
• internal_drop_edge() : utility::graph::LowMemNode
• internal_edge_list_size() : utility::graph::LowMemGraph< _LMNode, _LMEdge > , utility::graph::LowMemGraphBase
• internal_find_edge() : utility::graph::LowMemNode
• internal_get_edge() : utility::graph::LowMemGraph< _LMNode, _LMEdge > , utility::graph::LowMemGraphBase , utility::graph::LowMemNode
• internal_get_edge_list() : utility::graph::LowMemNode
• interpolate() : numeric::interpolation::Histogram< X, Y > , numeric::interpolation::spline::CompoundInterpolator , numeric::interpolation::spline::Interpolator , numeric::interpolation::spline::SimpleInterpolator
• interpolate_flat() : numeric::interpolation::Histogram< X, Y >
• interpolate_linear() : numeric::interpolation::Histogram< X, Y >
• interpolate_spline() : numeric::interpolation::Histogram< X, Y >
• InterpolatedPotential() : numeric::interpolation::InterpolatedPotential< N >
• interpolator() : numeric::interpolation::Histogram< X, Y >
• Interpolator() : numeric::interpolation::spline::Interpolator
• intersect() : ObjexxFCL::DynamicIndexRange , ObjexxFCL::IndexRange , ObjexxFCL::StaticIndexRange
• intersect3D_2Planes() : numeric::xyzTransform< T >
• intersect_nic() : ObjexxFCL::DynamicIndexRange
• intersects() : numeric::geometry::BoundingBox< T > , ObjexxFCL::DynamicIndexRange , ObjexxFCL::IndexRange , pointGroupHit
• IntervalSet() : numeric::IntervalSet< T >
• intra_check_dof1() : Arch , ArchP4_42 , ArchP6_32
• intra_check_dof2() : Arch , ArchP4_42 , ArchP6_32
• intra_move1A() : Arch
• intra_move1B() : Arch
• intra_move2A() : Arch
• intra_move2B() : Arch
• intra_slide1() : Arch
• intra_slide2() : Arch
• intra_slidedis_to_component_disp() : Arch , ArchP4_42 , ArchP6_32
• intra_xform1() : Arch
• intra_xform2() : Arch
• inv_xform() : numeric::xyzTransform< T >
• invalidate() : utility::signals::Link
• invalidate_all() : utility::signals::SignalHub< ReturnType, Signal >
• inverse() : numeric::BodyPosition< T > , numeric::fourier::kiss_dct_state , numeric::fourier::kiss_fft_state , numeric::fourier::kiss_fftnd_state , numeric::fourier::kiss_fftndr_state , numeric::fourier::kiss_fftr_state , numeric::fourier::kiss_fftsplit_state , numeric::HomogeneousTransform< T > , numeric::MathMatrix< T > , numeric::Quaternion< T > , numeric::xyzMatrix< T > , numeric::xyzTransform< T >
• inverse_diagonal_matrix() : numeric::MathMatrix< T >
• inverse_dimensions() : numeric::MathMatrix< T >
• inverse_rectangular_matrix() : numeric::MathMatrix< T >
• inverse_square_matrix() : numeric::MathMatrix< T >
• inverse_transform() : numeric::BodyPosition< T >
• inverse_transformed() : numeric::BodyPosition< T >
• inverse_translation() : numeric::BodyPosition< T >
• inverse_tridiagonal_matrix() : numeric::MathMatrix< T >
• InverseRotlibDumpMover() : InverseRotlibDumpMover
• inverseS2() : numeric::fourier::SHT
• inverseSo3() : numeric::fourier::SHT
• invert() : numeric::BodyPosition< T > , numeric::Quaternion< T > , utility::vectorL< L, bool, A >
• invert_helix() : ui::ui_protocols::helical_bundle::HelicalBundleDialogueWidget
• InvLegendre() : numeric::fourier::SO3coeffs
• ios_hook() : basic::TracerImpl
• irstream() : utility::io::irstream
• is_active() : ObjexxFCL::FArrayInitializer< T, Array >
• is_arithmetic() : basic_format_arg< Context >
• is_been_accessed() : utility::options::Option
• is_binded() : binder::Binder
• is_black_listed_file() : utility::Inline_File_Provider
• is_blank() : ObjexxFCL::Cstring , ObjexxFCL::Fstring
• is_bool() : ObjexxFCL::Fstring
• is_buffer_protocol_requested() : binder::Config
• is_char() : ObjexxFCL::Fstring
• is_cl_value() : utility::options::BooleanOption , utility::options::BooleanVectorOption , utility::options::FileOption , utility::options::FileVectorOption , utility::options::IntegerOption , utility::options::IntegerVectorOption , utility::options::Option , utility::options::PathOption , utility::options::PathVectorOption , utility::options::RealOption , utility::options::RealVectorOption , utility::options::ResidueChainVectorOption , utility::options::StringOption , utility::options::StringVectorOption
• is_clashing() : GlycanClashCheckMover
• is_class_binding_requested() : binder::Config
• is_class_skipping_requested() : binder::Config
• is_close() : numeric::HomogeneousTransform< T >
• is_connected() : Bola , Link
• is_custom_trampoline_function_requested() : binder::Config
• is_db_partitioned() : utility::sql_database::session
• is_default() : ObjexxFCL::FArray< T >
• is_diagonal() : numeric::MathMatrix< T >
• is_double() : ObjexxFCL::Fstring
• is_end_element() : utility::graph::DirectedEdgeList , utility::graph::EdgeList
• is_enum_binding_requested() : binder::Config
• is_enum_skipping_requested() : binder::Config
• is_exposed() : ExposedStrandMover
• is_false_value() : utility::options::BooleanOption , utility::options::BooleanVectorOption
• is_field_skipping_requested() : binder::Config
• is_finished() : ui::task::Functor
• is_finite() : numeric::xyzMatrix< T > , numeric::xyzVector< T >
• is_float() : ObjexxFCL::Fstring
• is_floating_sc() : PoseWrap
• is_flushed() : basic::basic_otstream< CharT, Traits >
• is_forward_needed() : binder::Context
• is_free() : Solver
• is_from() : boost::unordered_object_pool< T, UserAllocator >
• is_function() : ObjexxFCL::FArrayInitializer< T, Array >
• is_function_binding_requested() : binder::Config
• is_function_skipping_requested() : binder::Config
• is_group() : utility::options::Option
• is_group_holding_all() : utility::tag::XMLSchemaModelGroup
• is_gzip() : utility::io::izstream , utility::io::ozstream , zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
• is_head_node() : utility::graph::DirectedEdge
• is_hydrophobic() : MyAtom
• is_identity() : numeric::xyzMatrix< T > , ObjexxFCL::FArray2< T >
• is_in_system_header() : binder::Binder
• is_include_skipping_requested() : binder::Config
• is_inside() : numeric::IntervalSet< T >
• is_int() : ObjexxFCL::Fstring
• is_integral() : basic_format_arg< Context >
• is_leaf() : numeric::kdtree::KDNode
• is_literal() : numeric::expression_parser::ArithmeticASTValue
• is_long() : ObjexxFCL::Fstring
• is_longdouble() : ObjexxFCL::Fstring
• is_loop() : utility::graph::Edge
• is_lower_bound() : Solver
• is_module_local_requested() : binder::Config
• is_namespace_binding_requested() : binder::Config
• is_namespace_skipping_requested() : binder::Config
• is_normalized() : numeric::Quaternion< T > , numeric::xyzTriple< T > , numeric::xyzVector< T >
• is_null() : utility::json_spirit::Value_impl< Config >
• is_packed() : basic_format_args< Context >
• is_pure() : setup.PyRosettaDistribution
• is_relevant() : utility::options::OptionCollection
• is_required() : utility::tag::XMLSchemaAttribute
• is_root() : numeric::kdtree::KDNode
• is_rsd_designable() : PoseWrap
• is_rsd_repackable() : PoseWrap
• is_running() : ui::task::Functor
• is_short() : ObjexxFCL::Fstring
• is_smart_holder_requested() : binder::Config
• is_square() : numeric::MathMatrix< T >
• is_strand_exposed() : InterfaceStrandFinderMover
• is_string() : ObjexxFCL::Fstring
• is_subset() : pseudoTrace
• is_subset_of() : pointGroupHit
• is_subset_of_ignore_shift() : pointGroupHit
• is_syncing() : ui::task::Node , ui::task::Task , ui::task::TaskSyncer_NodeStrategy , ui::task::TaskSyncer_TaskStrategy
• is_tail_node() : utility::graph::DirectedEdge
• is_tri_diagonal() : numeric::MathMatrix< T >
• is_true_value() : utility::options::BooleanOption , utility::options::BooleanVectorOption
• is_type() : ObjexxFCL::Fstring
• is_uint() : ObjexxFCL::Fstring
• is_uint64() : utility::json_spirit::Value_impl< Config >
• is_ulong() : ObjexxFCL::Fstring
• is_uniform() : ObjexxFCL::FArray< T >
• is_unit() : numeric::xyzTriple< T > , numeric::xyzVector< T >
• is_upper_bound() : Solver
• is_ushort() : ObjexxFCL::Fstring
• is_valid_position() : numeric::MathNTensor< T, N > , numeric::MathNTensorBase< T > , numeric::MathTensor< T >
• is_value() : ObjexxFCL::FArrayInitializer< T, Array > , utility::options::BooleanOption , utility::options::BooleanVectorOption , utility::options::FileOption , utility::options::FileVectorOption , utility::options::IntegerOption , utility::options::IntegerVectorOption , utility::options::Option , utility::options::PathOption , utility::options::PathVectorOption , utility::options::RealOption , utility::options::RealVectorOption , utility::options::ResidueChainVectorOption , utility::options::StringOption , utility::options::StringVectorOption
• is_whitespace() : ObjexxFCL::Fstring
• is_zero() : numeric::xyzMatrix< T > , numeric::xyzTriple< T > , numeric::xyzVector< T > , ObjexxFCL::FArray< T >
• isAnimal() : Animal< I >
• isbad() : MatchLig
• isC() : pointGroupHit
• isC1() : pointGroupHit
• isCh() : pointGroupHit
• isCi() : pointGroupHit
• isCs() : pointGroupHit
• IsctFast() : IsctFast
• isCv() : pointGroupHit
• isD() : pointGroupHit
• isDd() : pointGroupHit
• isDh() : pointGroupHit
• isDog() : Animal< I > , Dog< I > , PyCallBack_Animal_1_t , PyCallBack_Dog_1_t , PyCallBack_Mammal_1_t
• isNullFrag() : FragMonteCarlo
• isO() : pointGroupHit
• isOverlapping() : FragMonteCarlo
• IsRelevantItem() : numeric::VoxelGrid< T >
• isS() : pointGroupHit
• IsSameItem() : numeric::VoxelGrid< T >
• isT() : pointGroupHit
• IsValidPosition() : numeric::MathMatrix< T >
• ITEExpression() : numeric::expression_parser::ITEExpression
• item() : numeric::random::WeightedReservoirItem< T >
• item_finished() : ui::task::FunctorASyncSequence
• iter_base() : numeric::geometry::hashing::xyzStripeHash::iter_base< C > , numeric::geometry::hashing::xyzStripeHashWithMeta< T >::iter_base< C >
• iterate() : pyrosetta.distributed.utility.log.ProgressLogger
• iterate_over_residues() : zinc_stats::ZincStatisticGenerator
• iterator_buffer() : detail::iterator_buffer< OutputIt, T, Traits > , detail::iterator_buffer< std::back_insert_iterator< Container >, enable_if_t< is_contiguous< Container >::value, typename Container::value_type > > , detail::iterator_buffer< T *, T >
• ivalue() : ObjexxFCL::DimensionExpression , ObjexxFCL::DimensionExpressionPow
• izstream() : utility::io::izstream