Here is a list of all class members with links to the classes they belong to:
- i -
- i
: Access
, Atom
, Bond
, formatter< TupleT, Char, enable_if_t< fmt::is_tuple_like< TupleT >::value > >::format_each< FormatContext >
, Integral
- I()
: numeric::BodyPosition< T >
, numeric::Quaternion< T >
, numeric::xyzMatrix< T >
, ObjexxFCL::FArray1< T >
, ObjexxFCL::FArray1A< T >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray1P< T >
, ObjexxFCL::KeyFArray1D< T >
- i
: pseudoCAbond
- I1()
: ObjexxFCL::FArray1< T >
, ObjexxFCL::FArray1A< T >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray1P< T >
, ObjexxFCL::FArray2< T >
, ObjexxFCL::FArray2A< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I1_
: ObjexxFCL::FArray2A< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I2()
: ObjexxFCL::FArray2< T >
, ObjexxFCL::FArray2A< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I2_
: ObjexxFCL::FArray2A< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- i2c_
: CrystFFTDock
- I3()
: ObjexxFCL::FArray3< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I3_
: ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I4()
: ObjexxFCL::FArray4< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I4_
: ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I5()
: ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I5_
: ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- I6()
: ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray6D< T >
- I6_
: ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray6D< T >
- I_
: ObjexxFCL::FArray1A< T >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray1P< T >
, ObjexxFCL::KeyFArray1D< T >
- i_
: Packing_energies
- i__not_binded
: Arrays
- i_last_chunk()
: ObjexxFCL::ChunkVector< T >
- i_not_binded
: Access
- i_protected_not_binded
: Access
- i_r
: Pointers_and_References
- i_stream_
: utility::io::icstream
- ia
: Base::InnerBase
- iacc_
: HBondedPairIterator
- IAM_
: IAMover
, UBQ_E2Mover
, UBQ_GTPase_disulfide_Mover
- IAMover()
: IAMover
- ib
: Base::InnerBase
- ich1
: Hit
- ich2
: Hit
- icmp1
: LMAX
- icmp2
: LMAX
- icstream()
: utility::io::icstream
- icys
: Hit
- id()
: binder::Binder
, binder::ClassBinder
, binder::EnumBinder
, binder::FunctionBinder
, detail::named_arg_info< Char >
, numeric::ClusteringTreeNode
, schema.Job
, utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
, utility::keys::VariantKey< K >
, utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption_T_< K, T >
- id_
: numeric::ClusteringTreeNode
, ScoreFragInfo
, utility::keys::AutoKey< O, S, C >
, utility::keys::UserKey< O, S, C >
- idctPlan
: numeric::fourier::SHT
- ideal_geometry
: erraser_option.erraser_option
- idealize_rings_
: DockGlycansProtocol
- identifier()
: utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
, utility::keys::VariantKey< K >
, utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption_T_< K, T >
- identifier_
: utility::keys::AutoKey< O, S, C >
, utility::keys::UserKey< O, S, C >
- IdentifyCDRClusters()
: IdentifyCDRClusters
- identity()
: numeric::BodyPosition< T >
, numeric::Quaternion< T >
, numeric::xyzMatrix< T >
, numeric::xyzTransform< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::KeyFArray2D< T >
- identity_protocol()
: pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest
- idmr
: Hit
- idon_
: HBondedPairIterator
- ids
: binder::Context
- idsf
: Hit
- idx_
: CAtrace
, numeric::kdtree::CompareKDPoints
- idx_to_euler()
: numeric::fourier::SHT
- idx_to_rot()
: numeric::fourier::SHT
- if_stream_
: utility::io::izstream
- iface_candidates
: MatchSet
- iface_check()
: MatchSet
- ifc()
: FunGroupTK
- ifc_
: FunGroupTK
, RotSel
- ifft2dslice()
: CrystFFTDock
- ifftPlan
: numeric::fourier::SHT
- ig_
: core::pack::annealer::FixbbSimAnnealer
, InteractionGraphPerformanceBenchmark
- ignore()
: utility::io::icstream
, utility::io::irstream
, utility::io::izstream
- ignore_errors
: pyrosetta.distributed.cluster.core.PyRosettaCluster
, pyrosetta.distributed.cluster.logging_listeners.SocketListener
- ignore_full_res_output_
: GlycanClashCheckMover
- ignore_hydrogens_
: GlycanClashCheckMover
- ihbr_
: HBondedPairIterator
- ihis
: Hit
- ii_not_binded
: Arrays
- iinfo
: InterfaceHit
- image_stack_
: SimulateCryoMover
- implicit_bit
: detail::fp
- in()
: basic::TracerImpl
- in_file_
: ScoreEachBenchmark
- in_list()
: utility::list_element< T >
- in_list_
: utility::list_element< T >
- in_map_
: basic::Emitter
- in_mem_
: MPInterfaceStatistics
- in_pdb_
: MPDomainAssembly
- in_place_list()
: utility::in_place_list< T >
- in_place_list< T >
: utility::list_element< T >
- INACTIVE
: ObjexxFCL::FArrayInitializer< T, Array >
- inactive()
: utility::Bound< T >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- INACTIVE
: utility::options::Option
- inactive_error()
: utility::options::ScalarOption_T_< K, T >
, utility::options::VectorOption_T_< K, T >
- incident_edge_list_
: utility::graph::DirectedNode
, utility::graph::Node
- include_citation_info()
: utility::tag::XMLSchemaDefinition
- include_citation_info_
: utility::tag::XMLSchemaDefinition
- include_native
: erraser_option.erraser_option
- include_neighbor_sc_
: protocols::antibody::design::AntibodyDesignMoverGenerator
- includes()
: binder::IncludeSet
- includes_
: binder::IncludeSet
- includes_code()
: binder::Config
- includes_to_add
: binder::Config
- includes_to_skip
: binder::Config
- incoming_edge_list_begin()
: utility::graph::DirectedNode
- incoming_edge_list_end()
: utility::graph::DirectedNode
- incoming_message_queue_is_empty()
: utility::SimulateMPI
- increase_count()
: numeric::histograms::TwoDHistogram< key1, key2 >
- increase_coval()
: utility::heap
- increment()
: HBondedPairIterator
, pyrosetta.distributed.utility.log.ProgressLogger
- increment_indentation()
: numeric::expression_parser::ASTPrinter
- increment_int()
: testers::test_my_struct
- increment_nread_limit()
: utility::io::FileContentsMap
- indegree()
: utility::graph::DirectedNode
- indegree_
: utility::graph::DirectedNode
- indent()
: utility::json_spirit::Generator< Value_type, Ostream_type >
- indent_
: basic::Emitter
- indent_depth_
: basic::Emitter
- indent_line()
: numeric::expression_parser::ASTPrinter
- indent_str_
: basic::Emitter
- indentation_level_
: numeric::expression_parser::ASTPrinter
, utility::json_spirit::Generator< Value_type, Ostream_type >
- Index()
: basic::database::schema_generator::Index
- index
: detail::arg_ref< Char >::value
, myspace::InputData
- Index
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
- index()
: ObjexxFCL::FArray1< T >
, ObjexxFCL::FArray1A< T >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray1P< T >
, ObjexxFCL::FArray2< T >
, ObjexxFCL::FArray2A< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
, svm_node
, SVR_Q
, ui::network::BowmanModel
, ui::task::ProjectModel
, ui::util::TreeNodeModel< T >
, utility::FixedSizeLexicographicalIterator< S >
, utility::graph::DS_Node
- Index
: utility::keys::AutoKey< O, S, C >
- index()
: utility::keys::AutoKey< O, S, C >
- Index
: utility::keys::ClassKeyMap< K, T, C >
- index()
: utility::keys::ClassKeyMap< K, T, C >
- Index
: utility::keys::ClassKeyVector< K, T, C >
- index()
: utility::keys::ClassKeyVector< K, T, C >
, utility::keys::Key
- Index
: utility::keys::Key
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
- index()
: utility::keys::SmallKeyMap< K, T >
- Index
: utility::keys::SmallKeyMap< K, T >
- index()
: utility::keys::SmallKeyVector< K, T >
- Index
: utility::keys::SmallKeyVector< K, T >
- index()
: utility::keys::UserKey< O, S, C >
- Index
: utility::keys::UserKey< O, S, C >
, utility::keys::VariantKey< K >
- index()
: utility::LexicographicalIterator
, utility::libsvm::Svm_node_rosetta
, utility::SimulateMPIMessage
- Index
: utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
- index()
: utility::vector1< T, A >
- Index
: utility::vector1< bool, A >
- index()
: utility::vector1< bool, A >
- Index
: utility::vectorL_IndexSelector< bool >
, utility::vectorL_IndexSelector< false >
- index()
: VallIndex
- index_
: Features
, utility::graph::UEVertex< V, E >
, utility::keys::AutoKey< O, S, C >
, utility::keys::UserKey< O, S, C >
, utility::libsvm::Svm_node_rosetta
, utility::SimulateMPIMessage
, VallIndex
- index_for_val()
: utility::heap
- index_of()
: utility::vectorL< L, T, A >
- index_of_next_message()
: utility::SimulateMPI
- index_to_file()
: ui::task::TaskView
- index_to_vd_
: utility::graph::RingDetection< Graph >
- index_type
: utility::keys::AutoKey< O, S, C >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::Key
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::keys::UserKey< O, S, C >
, utility::keys::VariantKey< K >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL_IndexSelector< bool >
, utility::vectorL_IndexSelector< false >
- IndexMap
: utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- IndexMapIndex
: utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- IndexMapSize
: utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- IndexPack()
: ui::network::IndexPack
- IndexRange()
: ObjexxFCL::IndexRange
- indicate_required_context_graphs()
: CapriTotalEnergy
, CapriTwoBodyEnergy
, MyCI1B
, test.T850_SubClassing.MyNewCI1B
- Indices
: numeric::VoxelArray< _Float, _Value >
- indices_
: basic::database::schema_generator::Schema
- indices_to_center()
: numeric::VoxelArray< _Float, _Value >
- infiles_
: MPDomainAssembly
- Info
: basic::Tracer
, basic::TracerImpl
- info()
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
, numeric::nls::lm_status_struct
- info_
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
- init()
: Arch
, basic::database::schema_generator::Schema
, basic::TracerImpl
, CenRotDockingMover
, CenRotRBRelaxMover
, ConstraintConfig
, DesignGlycansProtocol
, DockGlycansProtocol
, GlycanClashCheckMover
, GlycomutagenesisProtocol
, MatchBase
, MatchSet
, myspace::GraftTester
, numeric::fourier::SHT
, numeric::fourier::SO3coeffs
, numeric::geometry::hashing::MinimalClashHash
, numeric::geometry::hashing::SixDOffsetTree
, numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
, system_error
, TCDock
, ui::network::Argument
, ui::network::BooleanArgument
, ui::network::FloatArgument
, ui::network::IntegerArgument
, ui::network::PathArgument
, ui::network::StringArgument
- init_by_array()
: numeric::random::mt19937_RG
- init_clash_check()
: ClashCheck
, MatchSet
- init_for_input_yet_
: AbInitio_MPI
, FloppyTailMover
, HECTMover
, UBQ_E2Mover
, UBQ_GTPase_disulfide_Mover
- init_from_cmd()
: MPDomainAssembly
, MPInterfaceStatistics
, TestQuickRelaxMover
- init_from_local_file()
: ui::task::File
- init_on_new_input()
: AbInitio_MPI
, FloppyTailMover
, HECTAllMover
, HECTMover
, HECTUBQMover
, UBQ_E2Mover
, UBQ_GTPase_disulfide_Mover
- init_options()
: abbinding
, PhDocking
, PhProtocol
, SampleTiltProtocol
- init_pose_obj_
: protocols::abinitio::JumpSpecificAbrelax
- init_private_data_()
: SequenceProfileDB
- init_static_inputs()
: utility::Inline_File_Provider
- initial_mask()
: numeric::random::mt19937_RG
- initial_repack_mover_
: HemeReplace
- initial_value()
: ObjexxFCL::FArrayTraits< T >
, ObjexxFCL::FArrayTraits< numeric::xyzVector< T > >
, ObjexxFCL::TypeTraits< T >
- initialize()
: CountContact
, numeric::coordinate_fitting::FlatLookup< QueryType, EntryType, Real >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
, PBPotentialMover
- Initialize()
: utility::graph::RingDetection< Graph >
- initialize_
: LocalRmsd
- initialize_constraint_forest()
: protocols::abinitio::JumpSpecificAbrelax
- initialize_frag_assignment()
: FragMonteCarlo
- initialize_from_commandline()
: basic::resource_manager::ResourceManager
- initialize_from_options()
: basic::random::RandomGeneratorSettings
, HemeBindingMover
, MetalSiteFinderMover
, zinc_stats::ZincStatisticGenerator
- initialize_from_string()
: basic::citation_manager::Citation
- initialize_pose()
: ChallengeMover
- initialize_simulation()
: utility::SimulateMPI
- initialize_template_structures()
: ChallengeMover
- initialize_vertex()
: RerootRestypeVisitor
, utility::graph::null_bfs_prune_visitor
- initialized()
: numeric::random::RandomGenerator
, ObjexxFCL::Dimension
, ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionCon
, ObjexxFCL::DimensionExpressionCube
, ObjexxFCL::DimensionExpressionDiv
, ObjexxFCL::DimensionExpressionMax
, ObjexxFCL::DimensionExpressionMin
, ObjexxFCL::DimensionExpressionMul
, ObjexxFCL::DimensionExpressionPow
, ObjexxFCL::DimensionExpressionRef
, ObjexxFCL::DimensionExpressionSquare
, ObjexxFCL::DimensionExpressionSub
, ObjexxFCL::DimensionExpressionSum
, ObjexxFCL::DynamicIndexRange
, ObjexxFCL::IndexRange
- initialized_
: ObjexxFCL::Dimension
, RosettaJob
- initializeGL()
: MainWindow
, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget
- Initializer
: ObjexxFCL::FArray1D< T >
- initializer()
: ObjexxFCL::FArray1D< T >
- Initializer
: ObjexxFCL::FArray2D< T >
- initializer()
: ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray3D< T >
- Initializer
: ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray4D< T >
- initializer()
: ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray5D< T >
- Initializer
: ObjexxFCL::FArray5D< T >
- initializer()
: ObjexxFCL::FArray6D< T >
- Initializer
: ObjexxFCL::FArray6D< T >
- initializer()
: ObjexxFCL::KeyFArray1D< T >
- Initializer
: ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
- initializer()
: ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
- Initializer
: ObjexxFCL::KeyFArray3D< T >
- initializer()
: ObjexxFCL::KeyFArray4D< T >
- Initializer
: ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
- initializer()
: ObjexxFCL::KeyFArray5D< T >
- Initializer
: ObjexxFCL::KeyFArray6D< T >
- initializer()
: ObjexxFCL::KeyFArray6D< T >
- initializer_
: ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- initializer_active()
: ObjexxFCL::FArray1A< T >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray1P< T >
, ObjexxFCL::FArray2A< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::FArray< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- initializer_clear()
: ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- initializer_function
: ObjexxFCL::Fstring
- InitializerFunction
: ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::Fstring
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- InitializerSentinel
: ObjexxFCL::FArray1< T >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray2< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray3< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray4< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray< T >
, ObjexxFCL::internal::InitializerSentinel
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- initials()
: basic::citation_manager::AuthorNames
- initials_
: basic::citation_manager::AuthorNames
- initTestCase()
: FunctorTest
, NodeTest
- InjectorMover()
: InjectorMover
- Inline_File_Provider_Hook()
: utility::Inline_File_Provider_Hook
- inner_cycles_
: CenRotDockingMover
, SmoothFragRepackMover
- inner_product()
: numeric::alignment::QCPKernel< Real >
, numeric::xyzTriple< T >
, numeric::xyzVector< T >
- inorder_range_list()
: numeric::DietNode< T >
- inplace_product
: numeric::xyzMatrix< T >
, numeric::xyzVector< T >
- inplace_transpose_product
: numeric::xyzMatrix< T >
, numeric::xyzVector< T >
- input_
: SequenceProfileDB
- input_file
: schema.Job
- input_file_
: NativeEnsemble
- input_files
: utility::Inline_File_Provider
- input_id_from_resource_tag()
: basic::resource_manager::ResourceManager
- input_packed_pose
: pyrosetta.distributed.cluster.core.PyRosettaCluster
, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest
, pyrosetta.tests.distributed.cluster.test_smoke.TestBase
- input_pdb
: erraser_option.erraser_option
, InterfaceDDGBindInnerJob
- input_pdb_
: InterfaceDDGBindInnerJob
- input_pose_count_
: JDmover
- input_pose_length_
: JDmover
- input_pose_sequence_
: JDmover
- input_source()
: InterfaceDDGBindJobInputter
- insert()
: basic::datacache::WriteableCacheableMap
, numeric::DietNode< T >
, numeric::DiscreteIntervalEncodingTree< T >
, numeric::geometry::hashing::SixDOffsetTree
, numeric::kdtree::KDPointList
, utility::graph::DirectedEdgeList
, utility::graph::EdgeList
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyLookup< K >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- insert_
: sidechain_cst_3.Residue
- insert_after()
: utility::graph::NegSpaceElement< T >
- insert_as_observer()
: ObjexxFCL::Dimension
, ObjexxFCL::DynamicIndexRange
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray1P< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- insert_as_observer_of()
: ObjexxFCL::Dimension
- insert_data()
: numeric::histograms::OneDHistogram< key1 >
, numeric::histograms::TwoDHistogram< key1, key2 >
- insert_loop_end
: APDBCMover
- insert_loop_start
: APDBCMover
- insert_nonunique()
: utility::keys::KeyLookup< K >
- insert_observer()
: ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionCon
, ObjexxFCL::DimensionExpressionCube
, ObjexxFCL::DimensionExpressionDiv
, ObjexxFCL::DimensionExpressionMax
, ObjexxFCL::DimensionExpressionMin
, ObjexxFCL::DimensionExpressionMul
, ObjexxFCL::DimensionExpressionPow
, ObjexxFCL::DimensionExpressionRef
, ObjexxFCL::DimensionExpressionSquare
, ObjexxFCL::DimensionExpressionSub
, ObjexxFCL::DimensionExpressionSum
, ObjexxFCL::Observer
, ObjexxFCL::ObserverMulti
, ObjexxFCL::ObserverSingle
- insert_point
: APDBCMover
, numeric::RocCurve
- insert_template_frags()
: protocols::abinitio::JumpSpecificAbrelax
- insert_vector()
: Mode
- InsertGenerator()
: basic::database::insert_statement_generator::InsertGenerator
- insertion_operators
: binder::Context
- InsertObject()
: numeric::VoxelGrid< T >
- InsertObjects()
: numeric::VoxelGrid< T >
- instance
: pyrosetta.protocols.h5_fragment_store_provider.H5PyFragmentStoreProvider
, pyrosetta.protocols.h5_structure_store_provider.H5StructureStoreProvider
- instance_
: GetURLHandler
- instance_kwargs
: pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest
, pyrosetta.tests.distributed.cluster.test_smoke.TestBase
- instantiate_filters()
: InstantiateModulesBenchmark
- instantiate_movers()
: InstantiateModulesBenchmark
- instantiate_packer_palettes()
: InstantiateModulesBenchmark
- instantiate_res_selectors()
: InstantiateModulesBenchmark
- instantiate_reslvl_taskops()
: InstantiateModulesBenchmark
- instantiate_simple_metrics()
: InstantiateModulesBenchmark
- instantiate_taskops()
: InstantiateModulesBenchmark
- InstantiateModulesBenchmark()
: InstantiateModulesBenchmark
- int128_value
: detail::value< Context >
- int_of()
: ObjexxFCL::Fstring
- int_type
: detail::formatbuf< Char >
, utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- int_type_checker()
: detail::int_type_checker< ErrorHandler >
- int_value
: detail::value< Context >
- int_value_
: utility::py::Base
- int_writer()
: detail::int_writer< OutputIt, Char, UInt >
- integer()
: ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionCon
, ObjexxFCL::DimensionExpressionCube
, ObjexxFCL::DimensionExpressionDiv
, ObjexxFCL::DimensionExpressionMax
, ObjexxFCL::DimensionExpressionMin
, ObjexxFCL::DimensionExpressionMul
, ObjexxFCL::DimensionExpressionPow
, ObjexxFCL::DimensionExpressionRef
, ObjexxFCL::DimensionExpressionSquare
, ObjexxFCL::DimensionExpressionSub
, ObjexxFCL::DimensionExpressionSum
- integer_
: ObjexxFCL::DimensionExpressionCon
- integer_msg()
: utility::SimulateMPIMessage
- integer_msg_
: utility::SimulateMPIMessage
- integer_vectors_
: utility::options::OptionCollection
- IntegerOption()
: utility::options::IntegerOption
- IntegerOptionKey()
: utility::options::IntegerOptionKey
- Integers
: utility::options::OptionCollection
- integers_
: utility::options::OptionCollection
- integers_msg()
: utility::SimulateMPIMessage
- integers_msg_
: utility::SimulateMPIMessage
- IntegerVectorOption()
: utility::options::IntegerVectorOption
- IntegerVectorOptionKey()
: utility::options::IntegerVectorOptionKey
- IntegerVectors
: utility::options::OptionCollection
- integration_test_
: SimulateCryoMover
- InteractionDistMinimizer()
: InteractionDistMinimizer
- InteractionGraphPerformanceBenchmark()
: InteractionGraphPerformanceBenchmark
- intercept
: numeric::interpolation::spline::LinearFunction
- interchain
: ScoreBreakdown
- interface()
: TwoChainInterface
, TwoChainTenANeighbors
- interface_analyzer_
: zinc1_homodimer_design
, zinc2_homodimer_setup
- interface_detection_dis()
: protocols::antibody::design::AntibodyDesignMoverGenerator
- interface_dis_
: protocols::antibody::design::AntibodyDesignMoverGenerator
- interface_jump_
: CalcIrms
- interface_scorable_tree_
: zinc1_homodimer_design
- interface_tf_
: protocols::antibody::design::AntibodyDesignMoverGenerator
- InterfaceDDGBindInnerJob()
: InterfaceDDGBindInnerJob
- InterfaceDDGBindJobInputter()
: InterfaceDDGBindJobInputter
- InterfaceDDGMutationTask()
: InterfaceDDGMutationTask
- interfacedist_
: CrystFFTDock
- InterfaceFeaturesTests()
: InterfaceFeaturesTests
- InterfaceHit()
: InterfaceHit
- InterfaceHitDatabase()
: InterfaceHitDatabase
- InterfaceNeighborDefinition_
: HDdesignMover
- interfaces_
: MPInterfaceStatistics
- InterfaceSasaDefinition_
: UBQ_E2Mover
, UBQ_GTPase_disulfide_Mover
- InterfaceStrandFinderMover()
: InterfaceStrandFinderMover
- internal_add_edge()
: utility::graph::LowMemNode
- internal_create_new_edge()
: utility::graph::LowMemGraph< _LMNode, _LMEdge >
- internal_create_new_node()
: utility::graph::LowMemGraph< _LMNode, _LMEdge >
- internal_delete_self()
: utility::graph::LowMemEdge
- internal_deleted()
: utility::graph::LowMemEdge
- internal_drop_edge()
: utility::graph::LowMemNode
- internal_edge_list_size()
: utility::graph::LowMemGraph< _LMNode, _LMEdge >
, utility::graph::LowMemGraphBase
- internal_find_edge()
: utility::graph::LowMemNode
- internal_get_edge()
: utility::graph::LowMemGraph< _LMNode, _LMEdge >
, utility::graph::LowMemGraphBase
, utility::graph::LowMemNode
- internal_get_edge_list()
: utility::graph::LowMemNode
- interp
: numeric::interpolation::spline::interp_range
- interpolate()
: numeric::interpolation::Histogram< X, Y >
, numeric::interpolation::spline::CompoundInterpolator
, numeric::interpolation::spline::Interpolator
, numeric::interpolation::spline::SimpleInterpolator
- interpolate_flat()
: numeric::interpolation::Histogram< X, Y >
- interpolate_linear()
: numeric::interpolation::Histogram< X, Y >
- interpolate_spline()
: numeric::interpolation::Histogram< X, Y >
- InterpolatedPotential()
: numeric::interpolation::InterpolatedPotential< N >
- Interpolator
: numeric::interpolation::Histogram< X, Y >
- interpolator()
: numeric::interpolation::Histogram< X, Y >
- Interpolator()
: numeric::interpolation::spline::Interpolator
- interpolator_
: numeric::interpolation::Histogram< X, Y >
, numeric::interpolation::spline::SplineGenerator
- interpolators_
: numeric::interpolation::spline::CompoundInterpolator
- intersect()
: ObjexxFCL::DynamicIndexRange
, ObjexxFCL::IndexRange
, ObjexxFCL::StaticIndexRange
- intersect3D_2Planes()
: numeric::xyzTransform< T >
- intersect_nic()
: ObjexxFCL::DynamicIndexRange
- intersects()
: numeric::geometry::BoundingBox< T >
, ObjexxFCL::DynamicIndexRange
, ObjexxFCL::IndexRange
, pointGroupHit
- interval
: pyrosetta.tests.distributed.test_gil.HeartBeat
- Interval
: SwapElementsMover1
, SwapElementsMover2
- IntervalSet()
: numeric::IntervalSet< T >
- intf_
: MPInterfaceStatistics
- intra_check_dof1()
: Arch
, ArchP4_42
, ArchP6_32
- intra_check_dof2()
: Arch
, ArchP4_42
, ArchP6_32
- intra_move1A()
: Arch
- intra_move1A_
: Arch
- intra_move1B()
: Arch
- intra_move1B_
: Arch
- intra_move2A()
: Arch
- intra_move2A_
: Arch
- intra_move2B()
: Arch
- intra_move2B_
: Arch
- intra_slide1()
: Arch
- intra_slide1_
: Arch
- intra_slide2()
: Arch
- intra_slide2_
: Arch
- intra_slidedis_to_component_disp()
: Arch
, ArchP4_42
, ArchP6_32
- intra_xform1()
: Arch
- intra_xform1_
: Arch
- intra_xform2()
: Arch
- intra_xform2_
: Arch
- intrachain
: ScoreBreakdown
- inv_xform()
: numeric::xyzTransform< T >
- invalidate()
: utility::signals::Link
- invalidate_all()
: utility::signals::SignalHub< ReturnType, Signal >
- inverse()
: numeric::BodyPosition< T >
, numeric::fourier::kiss_dct_state
, numeric::fourier::kiss_fft_state
, numeric::fourier::kiss_fftnd_state
, numeric::fourier::kiss_fftndr_state
, numeric::fourier::kiss_fftr_state
, numeric::fourier::kiss_fftsplit_state
, numeric::HomogeneousTransform< T >
, numeric::MathMatrix< T >
, numeric::Quaternion< T >
, numeric::xyzMatrix< T >
, numeric::xyzTransform< T >
- inverse_
: numeric::fourier::kiss_fft_state
, numeric::fourier::kiss_fftnd_state
, numeric::fourier::kiss_fftndr_state
- inverse_diagonal_matrix()
: numeric::MathMatrix< T >
- inverse_dimensions()
: numeric::MathMatrix< T >
- inverse_rectangular_matrix()
: numeric::MathMatrix< T >
- inverse_square_matrix()
: numeric::MathMatrix< T >
- inverse_transform()
: numeric::BodyPosition< T >
- inverse_transformed()
: numeric::BodyPosition< T >
- inverse_translation()
: numeric::BodyPosition< T >
- inverse_tridiagonal_matrix()
: numeric::MathMatrix< T >
- InverseRotlibDumpMover()
: InverseRotlibDumpMover
- inverseS2()
: numeric::fourier::SHT
- inverseSo3()
: numeric::fourier::SHT
- invert()
: numeric::BodyPosition< T >
, numeric::Quaternion< T >
, utility::vectorL< L, bool, A >
- invert_helix()
: ui::ui_protocols::helical_bundle::HelicalBundleDialogueWidget
- InvLegendre()
: numeric::fourier::SO3coeffs
- iorb_
: HBondedPairIterator
- iori
: Hit
, LMAX
- ios_hook()
: basic::TracerImpl
- ios_saver_
: utility::json_spirit::Generator< Value_type, Ostream_type >
- ip_not_binded
: Consts
, Pointers_and_References
- ipka_
: PhProtocol
- iqg
: Hit
- ir
: Hit
- IR
: ObjexxFCL::FArray1< T >
, ObjexxFCL::FArray1A< T >
, ObjexxFCL::FArray1D< T >
, ObjexxFCL::FArray1P< T >
, ObjexxFCL::FArray2< T >
, ObjexxFCL::FArray2A< T >
, ObjexxFCL::FArray2D< T >
, ObjexxFCL::FArray2P< T >
, ObjexxFCL::FArray3< T >
, ObjexxFCL::FArray3A< T >
, ObjexxFCL::FArray3D< T >
, ObjexxFCL::FArray3P< T >
, ObjexxFCL::FArray4< T >
, ObjexxFCL::FArray4A< T >
, ObjexxFCL::FArray4D< T >
, ObjexxFCL::FArray4P< T >
, ObjexxFCL::FArray5< T >
, ObjexxFCL::FArray5A< T >
, ObjexxFCL::FArray5D< T >
, ObjexxFCL::FArray5P< T >
, ObjexxFCL::FArray6< T >
, ObjexxFCL::FArray6A< T >
, ObjexxFCL::FArray6D< T >
, ObjexxFCL::FArray6P< T >
, ObjexxFCL::FArray< T >
, ObjexxFCL::KeyFArray1D< T >
, ObjexxFCL::KeyFArray2D< T >
, ObjexxFCL::KeyFArray3D< T >
, ObjexxFCL::KeyFArray4D< T >
, ObjexxFCL::KeyFArray5D< T >
, ObjexxFCL::KeyFArray6D< T >
- iref
: FitMover
- ires_
: RotateSAXS
- iResid_
: protocols::jumping::LibraryJumpSetup
, protocols::jumping::SpecificJumpSetup
- irot
: Hit
- irot1_
: HBondedPairIterator
- irot2_
: HBondedPairIterator
- irstream()
: utility::io::irstream
- irt
: Hit
- is_active()
: ObjexxFCL::FArrayInitializer< T, Array >
- is_aln_chain_
: CalcIrms
- is_append
: erraser_option.erraser_option
- is_arithmetic()
: basic_format_arg< Context >
- is_been_accessed()
: utility::options::Option
- is_binded()
: binder::Binder
- is_black_listed_file()
: utility::Inline_File_Provider
- is_blank()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
- is_bool()
: ObjexxFCL::Fstring
- is_buffer_protocol_requested()
: binder::Config
- is_char()
: ObjexxFCL::Fstring
- is_cl_value()
: utility::options::BooleanOption
, utility::options::BooleanVectorOption
, utility::options::FileOption
, utility::options::FileVectorOption
, utility::options::IntegerOption
, utility::options::IntegerVectorOption
, utility::options::Option
, utility::options::PathOption
, utility::options::PathVectorOption
, utility::options::RealOption
, utility::options::RealVectorOption
, utility::options::ResidueChainVectorOption
, utility::options::StringOption
, utility::options::StringVectorOption
- is_clashing()
: GlycanClashCheckMover
- is_class_binding_requested()
: binder::Config
- is_class_skipping_requested()
: binder::Config
- is_close()
: numeric::HomogeneousTransform< T >
- is_connected()
: Bola
, Link
- is_custom_trampoline_function_requested()
: binder::Config
- is_db_partitioned()
: utility::sql_database::session
- is_default()
: ObjexxFCL::FArray< T >
- is_designable_
: PoseWrap
- is_diagonal()
: numeric::MathMatrix< T >
- is_double()
: ObjexxFCL::Fstring
- is_end_element()
: utility::graph::DirectedEdgeList
, utility::graph::EdgeList
- is_enum_binding_requested()
: binder::Config
- is_enum_skipping_requested()
: binder::Config
- is_exposed()
: ExposedStrandMover
- is_fa_
: RescoreSAXS
, RotateSAXS
- is_false_value()
: utility::options::BooleanOption
, utility::options::BooleanVectorOption
- is_field_skipping_requested()
: binder::Config
- is_finished()
: ui::task::Functor
- is_finite()
: numeric::xyzMatrix< T >
, numeric::xyzVector< T >
- is_float()
: ObjexxFCL::Fstring
- is_floating_sc()
: PoseWrap
- is_flushed()
: basic::basic_otstream< CharT, Traits >
- is_forward_needed()
: binder::Context
- is_free()
: Solver
- is_from()
: boost::unordered_object_pool< T, UserAllocator >
- is_function()
: ObjexxFCL::FArrayInitializer< T, Array >
- is_function_binding_requested()
: binder::Config
- is_function_skipping_requested()
: binder::Config
- is_group()
: utility::options::Option
- is_group_
: utility::options::Option
- is_group_holding_all()
: utility::tag::XMLSchemaModelGroup
- is_gzip()
: utility::io::izstream
, utility::io::ozstream
, zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
- is_head_node()
: utility::graph::DirectedEdge
- is_hydrophobic()
: MyAtom
- is_identity()
: numeric::xyzMatrix< T >
, ObjexxFCL::FArray2< T >
- is_in_system_header()
: binder::Binder
- is_include_skipping_requested()
: binder::Config
- is_inside()
: numeric::IntervalSet< T >
- is_int()
: ObjexxFCL::Fstring
- is_integral()
: basic_format_arg< Context >
- is_leaf()
: numeric::kdtree::KDNode
- is_literal()
: numeric::expression_parser::ArithmeticASTValue
- is_literal_
: numeric::expression_parser::ArithmeticASTValue
- is_long()
: ObjexxFCL::Fstring
- is_longdouble()
: ObjexxFCL::Fstring
- is_loop()
: utility::graph::Edge
- is_lower_bound()
: Solver
- is_module_local_requested()
: binder::Config
- is_namespace_binding_requested()
: binder::Config
- is_namespace_skipping_requested()
: binder::Config
- is_native_interface_
: CalcIrms
- is_normalized()
: numeric::Quaternion< T >
, numeric::xyzTriple< T >
, numeric::xyzVector< T >
- is_null()
: utility::json_spirit::Value_impl< Config >
- is_option_group
: options_class.Option
- is_packed()
: basic_format_args< Context >
, format_arg_store< Context, Args >
- is_pure()
: setup.PyRosettaDistribution
- is_relevant()
: utility::options::OptionCollection
- is_repackable_
: PoseWrap
- is_required()
: utility::tag::XMLSchemaAttribute
- is_required_
: utility::tag::XMLSchemaAttribute
- is_rgb
: detail::color_type
- is_root()
: numeric::kdtree::KDNode
- is_rsd_designable()
: PoseWrap
- is_rsd_repackable()
: PoseWrap
- is_running()
: ui::task::Functor
- is_setup
: pyrosetta.distributed.tasks.taskbase.TaskBase
- is_sformat_initialized
: numeric::random::mt19937_RG
- is_short()
: ObjexxFCL::Fstring
- is_smart_holder_requested()
: binder::Config
- is_sorted_
: HeapContainer< T, Comparator >
- is_square()
: numeric::MathMatrix< T >
- is_strand_exposed()
: InterfaceStrandFinderMover
- is_string()
: ObjexxFCL::Fstring
- is_subset()
: pseudoTrace
- is_subset_of()
: pointGroupHit
- is_subset_of_ignore_shift()
: pointGroupHit
- is_supported_float
: detail::fp
- is_syncing()
: ui::task::Node
, ui::task::Task
, ui::task::TaskSyncer_NodeStrategy
, ui::task::TaskSyncer_TaskStrategy
- is_tail_node()
: utility::graph::DirectedEdge
- is_tri_diagonal()
: numeric::MathMatrix< T >
- is_true_value()
: utility::options::BooleanOption
, utility::options::BooleanVectorOption
- is_type()
: ObjexxFCL::Fstring
- is_uint()
: ObjexxFCL::Fstring
- is_uint64()
: utility::json_spirit::Value_impl< Config >
- is_ulong()
: ObjexxFCL::Fstring
- is_uniform()
: ObjexxFCL::FArray< T >
- is_unit()
: numeric::xyzTriple< T >
, numeric::xyzVector< T >
- is_upper_bound()
: Solver
- is_ushort()
: ObjexxFCL::Fstring
- is_valid_position()
: numeric::MathNTensor< T, N >
, numeric::MathNTensorBase< T >
, numeric::MathTensor< T >
- is_value()
: ObjexxFCL::FArrayInitializer< T, Array >
, utility::options::BooleanOption
, utility::options::BooleanVectorOption
, utility::options::FileOption
, utility::options::FileVectorOption
, utility::options::IntegerOption
, utility::options::IntegerVectorOption
, utility::options::Option
, utility::options::PathOption
, utility::options::PathVectorOption
, utility::options::RealOption
, utility::options::RealVectorOption
, utility::options::ResidueChainVectorOption
, utility::options::StringOption
, utility::options::StringVectorOption
- is_whitespace()
: ObjexxFCL::Fstring
- is_zero()
: numeric::xyzMatrix< T >
, numeric::xyzTriple< T >
, numeric::xyzVector< T >
, ObjexxFCL::FArray< T >
- isAnimal()
: Animal< I >
- isbad()
: MatchLig
- isC()
: pointGroupHit
- isC1()
: pointGroupHit
- isC1_
: pointGroupHit
- isC_
: pointGroupHit
- isCh()
: pointGroupHit
- isCh_
: pointGroupHit
- isCi()
: pointGroupHit
- isCi_
: pointGroupHit
- isCs()
: pointGroupHit
- isCs_
: pointGroupHit
- IsctFast()
: IsctFast
- isCv()
: pointGroupHit
- isCv_
: pointGroupHit
- isD()
: pointGroupHit
- isD_
: pointGroupHit
- isDd()
: pointGroupHit
- isDd_
: pointGroupHit
- isDh()
: pointGroupHit
- isDh_
: pointGroupHit
- isDog()
: Animal< I >
, Dog< I >
, PyCallBack_Animal_1_t
, PyCallBack_Dog_1_t
, PyCallBack_Mammal_1_t
- isDS_
: PairScore
- iseed_
: numeric::random::mt19937_RG
- isep_residue_
: CountContact
- islide
: Hit
- isNullFrag()
: FragMonteCarlo
- isO()
: pointGroupHit
- isO_
: pointGroupHit
- isOverlapping()
: FragMonteCarlo
- IsRelevantItem()
: numeric::VoxelGrid< T >
- iss
: Hit
- isS()
: pointGroupHit
- isS_
: pointGroupHit
- IsSameItem()
: numeric::VoxelGrid< T >
- isT()
: pointGroupHit
- isT_
: pointGroupHit
- istream_iter
: utility::json_spirit::Multi_pass_iters< Istream_type >
- istream_reference
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
- istream_type
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- IsValidPosition()
: numeric::MathMatrix< T >
- it_
: utility::DereferenceIterator< Container >
- ITEExpression()
: numeric::expression_parser::ITEExpression
- item()
: numeric::random::WeightedReservoirItem< T >
- item_
: numeric::random::WeightedReservoirItem< T >
- item_finished()
: ui::task::FunctorASyncSequence
- iter_added_last_
: myspace::Scheduler
- iter_base()
: numeric::geometry::hashing::xyzStripeHash::iter_base< C >
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >::iter_base< C >
- iter_updated_last_
: myspace::Scheduler
- iterate()
: pyrosetta.distributed.utility.log.ProgressLogger
- iterate_over_residues()
: zinc_stats::ZincStatisticGenerator
- iteration
: pyrosetta.distributed.utility.log.ProgressLogger
, schema.Trajectory
- iterations
: apps::pilot::KicSandbox
, pyrosetta.distributed.utility.log.ProgressLogger
, SamplingManager
, schema.Job
- iterations_
: NativeEnsemble
- iterator
: basic::datacache::ConstDataMap
, basic::datacache::DataMap
, basic_format_context< OutputIt, Char >
, basic_format_parse_context< Char, ErrorHandler >
, basic_printf_context< OutputIt, Char >
, basic_string_view< Char >
, detail::arg_formatter< OutputIt, Char >
, detail::arg_formatter_base< OutputIt, Char, ErrorHandler >
, detail::int_writer< OutputIt, Char, UInt >
, formatter< std::chrono::duration< Rep, Period >, Char >
, numeric::kdtree::KDPointList
, ObjexxFCL::CArray< T >
- Iterator
: ObjexxFCL::CArray< T >
- iterator
: ObjexxFCL::CArrayP< T >
- Iterator
: ObjexxFCL::CArrayP< T >
, ObjexxFCL::ChunkVector< T >
, ObjexxFCL::SetWrapper< T >
- iterator
: ObjexxFCL::SetWrapper< T >
, printf_arg_formatter< OutputIt, Char >
, utility::BitSet< B >
- Iterator
: utility::BitSet< B >
- iterator
: utility::BitVector< B >
- Iterator
: utility::BitVector< B >
- iterator
: utility::fixedsizearray0< T, S >
, utility::fixedsizearray1< T, S >
, utility::keys::ClassKeyMap< K, T, C >
- Iterator
: utility::keys::ClassKeyMap< K, T, C >
- iterator
: utility::keys::ClassKeyVector< K, T, C >
- Iterator
: utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyMapTraits< K, T >
- iterator
: utility::keys::KeyMapTraits< K, T >
- Iterator
: utility::keys::KeySetTraits< K >
- iterator
: utility::keys::KeySetTraits< K >
- Iterator
: utility::keys::KeyVector< K, T >
- iterator
: utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
- Iterator
: utility::keys::KeyVectorTraits< K >
- iterator
: utility::keys::SmallKeyMap< K, T >
- Iterator
: utility::keys::SmallKeyMap< K, T >
- iterator
: utility::keys::SmallKeyVector< K, T >
- Iterator
: utility::keys::SmallKeyVector< K, T >
- iterator
: utility::options::VectorOption_T_< K, T >
- Iterator
: utility::options::VectorOption_T_< K, T >
- iterator
: utility::OrderedTuple< T >
, utility::vector0< T, A >
- Iterator
: utility::vector0< T, A >
- iterator
: utility::vector0< bool, A >
- Iterator
: utility::vector0< bool, A >
, utility::vector1< T, A >
- iterator
: utility::vector1< T, A >
- Iterator
: utility::vector1< bool, A >
- iterator
: utility::vector1< bool, A >
, utility::vectorL< L, T, A >
- Iterator
: utility::vectorL< L, T, A >
- iterator
: utility::vectorL< L, bool, A >
- Iterator
: utility::vectorL< L, bool, A >
- iterator_buffer()
: detail::iterator_buffer< OutputIt, T, Traits >
, detail::iterator_buffer< std::back_insert_iterator< Container >, enable_if_t< is_contiguous< Container >::value, typename Container::value_type > >
, detail::iterator_buffer< T *, T >
- iterator_category
: detail::counting_iterator
, detail::truncating_iterator_base< OutputIt >
, numeric::geometry::hashing::xyzStripeHash::iter_base< C >
, numeric::sphericalVector< T >
, numeric::xyzTriple< T >
, numeric::xyzVector< T >
, ObjexxFCL::CArray< T >
, ObjexxFCL::CArrayP< T >
, ObjexxFCL::FArray1< T >
, utility::DereferenceIterator< Container >
- iters_
: utility::json_spirit::Stream_reader< Istream_type, Value_type >
, utility::json_spirit::Stream_reader_thrower< Istream_type, Value_type >
- ItType
: rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >
- itype
: Hit
- ivalue()
: ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionPow
- izstream()
: utility::io::izstream