- d -

• d : DCST , Floating_point , S::_D , W128_T
• d_ : ObjexxFCL::format::Bite< T >
• d_bundle_ids : gpu_node_block_ptrs
• d_calculate_pair_table : calculation_data_for_one_block_pair
• d_clash_table : calculation_data_for_one_block_pair
• d_good_node_pairs : calculation_data_for_one_block_pair
• d_n_good_node_pairs : calculation_data_for_one_block_pair
• d_rmsd_table : calculation_data_for_one_block_pair
• dang : Hit
• dashboard_address : pyrosetta.distributed.cluster.core.PyRosettaCluster
• dashed : pyrosetta.distributed.viewer.modules.setHydrogenBonds
• data : Base , Cache::head_t , Derived , detail::format_part_array< Char, N > , detail::named_arg_value< Char > , detail::string_value< Char > , schema.NumpyCache , TemplateSpecialization< T > , utility::thread::SharedThreadLocalData< T >
• data_ : basic::database::insert_statement_generator::RowData< T > , basic::datacache::DataCache< Data > , basic::datacache::DiagnosticData , basic::MetricValue< T > , basic::Report , basic_cstring_view< Char > , basic_string_view< Char > , bytes , detail::counting_buffer< T > , detail::fill_t< Char > , detail::iterator_buffer< OutputIt, T, Traits > , dynamic_format_arg_store< Context > , format_arg_store< Context, Args > , numeric::geometry::hashing::SixDOffsetTree , numeric::kdtree::KDPoint , numeric::MathMatrix< T > , numeric::MathNTensor< T, N > , numeric::MathTensor< T > , numeric::MathVector< T > , numeric::VoxelArray< _Float, _Value > , pseudoTraceRecords , utility::DenseBoolMap< NUM_ELEMS, BASE_INDEX > , utility::graph::UEEdge< V, E > , utility::graph::UEVertex< V, E > , utility::list_element< T > , utility::OrderedTuple< T > , utility::thread::MutableCache< K, V >
• data_creator_map_ : basic::datacache::WriteableCacheableDataFactory
• data_far_ : myspace::DataClass
• data_map_ : basic::datacache::ConstDataMap , basic::datacache::DataMap , basic::datacache::HierarchicalDataMap
• data_n : GunnTest
• data_p : GunnTest
• data_self_ : myspace::DataClass
• database_session_resource_tag_ : basic::resource_manager::locator::DatabaseResourceLocator
• database_window : job_manager.CommandWindow
• db : pyrosetta.protocols.structure_search.StructureSearchManager
• db_mode_ : utility::sql_database::session
• db_name_ : InterfaceFeaturesTests , utility::sql_database::session
• db_partition_ : utility::sql_database::session
• db_session_ : basic::resource_manager::locator::DatabaseResourceLocator , InterfaceFeaturesTests
• db_to_use_threshold_ : ClosabilityScore
• dcst : ConstraintConfig
• dctPlan : numeric::fourier::SHT
• ddg : HIT
• DDG_CUT_ : CrystDesign
• ddis : Hit
• ddy_ : numeric::interpolation::spline::SimpleInterpolator
• Debug : basic::Tracer , basic::TracerImpl
• debug : erraser_option.erraser_option , PoseWrap
• debug_ : CrystFFTDock , MyRotMover , MyTransMover
• debug_exact_ : CrystFFTDock
• decimal_digits : detail::dragonbox::float_info< double > , detail::dragonbox::float_info< float >
• decoder : pyrosetta.distributed.cluster.serialization.Serialization
• decoy_dir_name : pyrosetta.distributed.cluster.core.PyRosettaCluster , pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest
• decoy_ids : pyrosetta.distributed.cluster.core.PyRosettaCluster
• decoy_path : pyrosetta.distributed.cluster.core.PyRosettaCluster
• decoy_satisfactions_ : ConstraintStatsMover
• decoy_violations_ : ConstraintStatsMover
• decoys_ : ui::viewers::ScoreFileView
• decoys_path_ : ui::viewers::ScoreFileView
• default : job_manager.CommandLauncher , job_manager.CorrelationTime , job_manager.TorsionVsTime , options_class.Option
• default_ : ui::network::BooleanArgument , ui::network::FloatArgument , ui::network::IntegerArgument , ui::network::StringArgument
• default_call_guard_ : binder::Config
• default_client : pyrosetta.tests.distributed.cluster.test_smoke.TestBase
• default_member_lvalue_reference_return_value_policy_ : binder::Config
• default_member_pointer_return_value_policy_ : binder::Config
• default_member_rvalue_reference_return_value_policy_ : binder::Config
• default_options : pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask
• default_state_ : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_static_lvalue_reference_return_value_policy_ : binder::Config
• default_static_pointer_return_value_policy_ : binder::Config
• default_static_rvalue_reference_return_value_policy_ : binder::Config
• default_value_ : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T > , utility::tag::XMLSchemaAttribute
• defer_ : basic::database::schema_generator::ForeignKey
• degree : Kernel , svm_parameter
• degree_ : numeric::Polynomial_1d
• delay : pyrosetta.distributed.viewer.core.Viewer
• delay_level1_ : AppSettings
• delay_level2_ : AppSettings
• delay_level3_ : AppSettings
• delete_contents_at_nread_limit_ : utility::io::FileContentsMap
• deleted_ : utility::graph::UEEdge< V, E >
• deleted_edges_offsets_ : utility::graph::LowMemGraph< _LMNode, _LMEdge >
• delimiter : formatting_range< Char, Enable > , formatting_tuple< Char, Enable >
• delta : basic::sampling::orientations::QuatDBMetadata , basic::sampling::orientations::QuaternionGrid
• delta_ : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::CubicSpline , numeric::interpolation::spline::PolycubicSpline< N > , numeric::interpolation::spline::PolycubicSpline< 1 > , numeric::interpolation::spline::PolycubicSpline< 2 > , numeric::interpolation::spline::TricubicSpline
• dens_cut : ElecDensMinPackMinReporter
• dens_score_ : CAtrace
• DENS_WT : pseudoTrace
• dens_wt_ : FragmentAssemblyMover
• densities_ : numeric::interpolation::Histogram< X, Y >
• density_wt_ : MinPackMin
• dependencies_ : binder::ClassBinder
• des : HubDenovo
• desc : format_arg_store< Context, Args > , options_class.Option
• desc_ : basic_format_args< Context > , utility::tag::XMLSchemaComplexType
• description : schema.Job , utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
• description_ : NativeEnsemble , ui::network::Argument , ui::task::Task , utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T > , utility::tag::XMLSchemaAttribute , utility::tag::XMLSchemaComplexTypeGeneratorImpl
• design_mover_ : HemeBindingMover
• design_pose : DesignBenchmark
• design_res_user : PoseWrap
• design_score_function_ : HemeBindingMover
• designer_ : DesignGlycansProtocol
• deviations_ : SpartaSuperDeviationMover , SuperDeviationMover
• device_id_ : CL
• devmajor : utility::io::TarFileHeader
• devminor : utility::io::TarFileHeader
• digits : detail::basic_data< T >
• dihed_scorefxn_ : zinc1_homodimer_design
• dihedral_func_ : HemeBindingMover
• dihedral_func_2_ : HemeBindingMover
• dihedral_stdev_ : ZincMatchFilter
• dihedral_weight_ : ZincMatchFilter
• DIM : numeric::VoxelArray< _Float, _Value >
• dim_labels_ : numeric::MultiDimensionalHistogram
• dim_p_ : ObjexxFCL::DimensionExpressionRef
• dim_sizes_ : utility::FixedSizeLexicographicalIterator< S > , utility::LexicographicalIterator
• dimensionality_ : numeric::interpolation::spline::PolycubicSplineBase , numeric::MathNTensorBase< T >
• dimOther_ : numeric::fourier::kiss_fftndr_state
• dimprod_ : numeric::fourier::kiss_fftnd_state
• dimprods_ : numeric::geometry::hashing::SixDCoordinateBinner
• dimReal_ : numeric::fourier::kiss_fftndr_state
• dims_ : numeric::fourier::kiss_fftnd_state
• dimsizes_ : numeric::geometry::hashing::SixDCoordinateBinner
• disallow_res_ : HDdesignMover
• dismiss_button : job_manager.StatusWindow
• dist : DisulfideBondEnergy
• dist_ : InteractionDistMinimizer , SSM_energies
• dist_func_ : HemeBindingMover
• dist_mins_ : ConstraintStatsMover
• dist_to_detector_ : SimulateCryoMover
• DIST_WT : pseudoTrace
• distance_ : numeric::ClusteringTreeNode , numeric::kdtree::KDPoint
• distance_cutoff_ : MetalSiteFinderMover , numeric::kdtree::KDPointList
• distance_stdev_ : ZincMatchFilter
• distance_threshold_ : SwapElementsMover1 , SwapElementsMover2
• distance_weight_ : ZincMatchFilter
• distances_ : DistanceMatrix , utility::graph::RingSizeVisitor< Graph, DistanceMap, LabelMap >
• disth : KRSQuery
• distmax_matrix : protocols::moves::SimpleCstMover
• distmin_matrix : protocols::moves::SimpleCstMover
• distribution_ : NonceHistogram , numeric::random::DistributionSampler< T >
• disulfide_mm_ : UBQ_GTPase_disulfide_Mover
• disulfs : DisulfEposDatabase
• divisibility_check_by_5_threshold : detail::dragonbox::float_info< double > , detail::dragonbox::float_info< float >
• divtest_table_for_pow5_32 : detail::basic_data< T >
• divtest_table_for_pow5_64 : detail::basic_data< T >
• do_repack_ : CenRotDockingMover
• doc : pyrosetta.distributed.docs.ComponentDoc
• docking : DockingBenchmark< dock, TScale >
• docking_scorefxn_high_ : protocols::antibody::design::AntibodyDesignMoverGenerator
• docking_scorefxn_low_ : protocols::antibody::design::AntibodyDesignMoverGenerator
• dofs_ : MyRotMover , MySlideMover , MyTransMover
• doi_ : basic::citation_manager::Citation
• doi_rosetta_citation_map_ : basic::citation_manager::CitationManager
• domains_ : DomainFinder
• donor_atoms_ : HBondedPairIterator
• donor_bases_ : HBondedPairIterator
• double_msg_ : utility::SimulateMPIMessage
• double_significand_size : detail::fp
• double_value : detail::value< Context >
• doubles_msg_ : utility::SimulateMPIMessage
• downstream_chains_ : DockGlycansProtocol
• dphi : BBG_Cyclic_Mover
• drag_mode_ : ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget
• dragonbox_pow10_recovery_errors : detail::basic_data< T >
• dragonbox_pow10_significands_128 : detail::basic_data< T >
• dragonbox_pow10_significands_64 : detail::basic_data< T >
• dres1 : CST
• dres2 : CST
• dry_pose_ : xtal_water_bunsat
• dry_run : pyrosetta.distributed.cluster.core.PyRosettaCluster
• dry_run_ : basic::ComparingTracer
• dsecox_ : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::CubicSpline , numeric::interpolation::spline::TricubicSpline
• dsecoxy_ : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::TricubicSpline
• dsecoxyz_ : numeric::interpolation::spline::TricubicSpline
• dsecoxz_ : numeric::interpolation::spline::TricubicSpline
• dsecoy_ : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::TricubicSpline
• dsecoyz_ : numeric::interpolation::spline::TricubicSpline
• dsecoz_ : numeric::interpolation::spline::TricubicSpline
• dssp_ : apps::pilot::frankdt::SecondaryStruct
• dst_ : utility::SimulateMPIMessage
• dst_2_src_ : utility::subset_mapping
• dualspace_ : protocols::antibody::design::AntibodyDesignMoverGenerator
• dump_frequency_ : NativeEnsemble
• dump_pdb_ : myspace::DataClass
• dump_pdbs_ : SpartaSuperDeviationMover
• dump_pose_freq : OutputManager
• dump_stats_freq : OutputManager
• dy : numeric::interpolation::spline::Point
• dynamic_args_ : dynamic_format_arg_store< Context >