- m -
- M_
: basic::svd::SVD_Solver
- m_
: utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- m_arr
: basic::sampling::orientations::Permute
- m_buf
: utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
- m_buffer
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_crc
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_err
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_gzip_crc
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- m_gzip_data_size
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- m_input_buffer
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_is_gzip
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
- m_istream
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_mpi_stream_finalized
: utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
- M_MUT_CUT_
: CrystDesign
- m_ostream
: zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_output_buffer
: zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_v
: basic::sampling::orientations::QuatSet
- m_w
: basic::sampling::orientations::QuatSet
- m_zip_stream
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_zip_stream_finalized
: zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
- mag12_
: DuboisChiMover
- mag3_
: DuboisChiMover
- mag4_
: DuboisChiMover
- mag_
: BBMover
, CycBBMover
, MyRotMover
, MyTransMover
, SimpleBBMover
- Magenta
: basic::Tracer
, basic::TracerImpl
- magic
: utility::io::TarFileHeader
- main_task_factory
: JDtestmover
- main_task_factory_
: SymFixbbMover
- make_pdb_
: RosettaHolesMover
- make_voids_
: RosettaHolesMover
- manager_
: myspace::GraftTester
- map_
: basic::datacache::CacheableStringFloatMap
, basic::datacache::CacheableStringIntegerMap
, basic::datacache::CacheableStringMap
, basic::datacache::CacheableUint64MathMatrixFloatMap
, basic::datacache::WriteableCacheableMap
- map_file
: erraser_option.erraser_option
- map_reso
: erraser_option.erraser_option
- map_RNA_index_to_full
: mutant_modeler.MutantModeler
- map_s2_
: Results_Keeper
- map_s_
: Results_Keeper
- mapOP_
: basic::datacache::CacheableResRotPairFloatMap
- mapped_type
: dynamic_format_arg_store< Context >::need_copy< T >
- mapping_
: ThisApplication
- masks_
: RTminOptMultifunc
- master_poses_
: ExposedStrandMover
- master_rank_
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- match1_
: zinc2_homodimer_setup
- match2_
: zinc2_homodimer_setup
- match_name_
: HbondZincBackbone
- match_pose_
: HbondZinc
- matches
: pyrosetta.tests.distributed.cluster.test_smoke.RuntimeTestLoggingFilter
- max_
: apps::pilot::frankdt::SecondaryStruct
, ui::network::FloatArgument
, ui::network::IntegerArgument
- max_atype_
: RDF_Mover
- max_delay_time
: pyrosetta.distributed.cluster.core.PyRosettaCluster
- max_exponent
: detail::dragonbox::float_info< double >
, detail::dragonbox::float_info< float >
- max_k
: detail::dragonbox::float_info< double >
, detail::dragonbox::float_info< float >
- max_loop_size_
: MetalSiteFinderMover
- max_occurs
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
- max_occurs_
: utility::tag::XMLSchemaParticle
- max_packet_size
: pyrosetta.distributed.cluster.logging_listeners.SocketListener
- max_quotient
: detail::divtest_table_entry< T >
- max_registry_shift_
: apps::pilot::MultiTemplateAlignChunkMover
- max_registry_shift_input_
: apps::pilot::MultiTemplateAlignChunkMover
- max_res_span_
: MetalSiteFinderMover
- max_RMSD_
: InterfaceStrandFinderMover
- max_scale_
: myspace::Scheduler
- max_size
: ObjexxFCL::FArray< T >
- max_trailing_zeros
: detail::dragonbox::float_info< double >
, detail::dragonbox::float_info< float >
- max_val_
: numeric::Polynomial_1d
- max_vals_
: numeric::kdtree::KDPointList
- max_values_
: HeapContainer< T, Comparator >
- max_workers
: pyrosetta.distributed.cluster.core.PyRosettaCluster
- maxcall
: numeric::nls::lm_control_struct
- maxCBDistance
: DisulfideBondEnergy
- maxclash_
: CrystFFTDock
- maxE_
: ExposedStrandMover
, HDmakerMover
, InterfaceStrandFinderMover
- maximum_file_length
: binder::Config
- maxiter_
: myspace::Scheduler
- maxmode_
: myspace::Scheduler
- MaxNumberElements_
: numeric::VoxelGrid< T >
- maxrad_
: basic::sampling::orientations::QuaternionGrid
- maxRMSD_
: ExposedStrandMover
- mc_
: CenRotCanonicalMover
, CenRotDockingMover
, DockGlycansProtocol
, GlycomutagenesisProtocol
, SmoothFragRepackMover
, zinc1_homodimer_design
- mc_steps_
: CenRotCanonicalMover
- mc_temp_
: CenRotCanonicalMover
- mdl_cnt_
: ComputeSAXSSpectrum
- meanNeg
: DisulfideBondEnergy
- meanPos
: DisulfideBondEnergy
- med_res_WT_rebuild
: mutant_modeler.MutantModeler
- mem_from_topo_
: TestQuickRelaxMover
- members_
: utility::json_spirit::Json_grammer< Value_type, Iter_type >::definition< ScannerT >
- membrane_
: MPInterfaceStatistics
- memory
: pyrosetta.distributed.cluster.core.PyRosettaCluster
- mer
: FragID
- message_
: nacl_rosetta::RosettaInstance
- messages_
: utility::SimulateMPIData
- messages_for_node_
: utility::SimulateMPIData
- messages_from_node_
: utility::SimulateMPIData
- metal_scorefxn_
: zinc1_homodimer_design
- method
: mutant_modeler.MutantModeler
- method_code_
: PhProtocol
- metrics_
: MakeSegmentFileMPI
- mhscore_
: TCDock
- min_
: apps::pilot::frankdt::SecondaryStruct
, numeric::ClusterOptions
, numeric::interpolation::Histogram< X, Y >
, ScMinMover
, ui::network::FloatArgument
, ui::network::IntegerArgument
- min_all_
: MinPackMinMover
- min_all_jumps
: MinPackMin
- min_coord_res_
: MetalSiteFinderMover
- min_exponent
: detail::dragonbox::float_info< double >
, detail::dragonbox::float_info< float >
- min_i_
: numeric::ClusterOptions
- min_interface_
: protocols::antibody::design::AntibodyDesignMoverGenerator
- min_j_
: numeric::ClusterOptions
- min_k
: detail::dragonbox::float_info< double >
, detail::dragonbox::float_info< float >
- min_local_coord_atoms_
: MetalSiteFinderMover
- min_mover_
: ZincMinimize
- min_occurs
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
- min_occurs_
: utility::tag::XMLSchemaParticle
- min_or_max_occurs_set
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
- min_rs
: pyrosetta.tests.distributed.test_smoke.SmokeTestDistributed
- min_sc_
: protocols::antibody::design::AntibodyDesignMoverGenerator
- min_scale_
: myspace::Scheduler
- min_total_coord_atoms_
: MetalSiteFinderMover
- min_val_
: numeric::Polynomial_1d
- min_workers
: pyrosetta.distributed.cluster.core.PyRosettaCluster
- minimize_bb
: DesignOpts
- minimize_chi
: DesignOpts
- minimize_rb
: DesignOpts
- minimizer
: MinimizerBenchmark< sft, TScale >
- minimizer_
: dsRNA_grow
, GlycomutagenesisProtocol
- minimizer_options_
: dsRNA_grow
- mininterface_
: CrystFFTDock
- mininterface_sum_
: CrystFFTDock
- minmover_
: MoveThenFixHMin
- MinNumberElements_
: numeric::VoxelGrid< T >
- minpack_mover_
: HemeBindingMover
- MinResolution_
: numeric::VoxelGrid< T >
- MinX_
: numeric::VoxelGrid< T >
- MinY_
: numeric::VoxelGrid< T >
- MinZ_
: numeric::VoxelGrid< T >
- mm
: MinimizerBenchmark< sft, TScale >
- mm_
: GlycomutagenesisProtocol
- mod_inv
: detail::divtest_table_entry< T >
- mode
: Mode
, utility::io::TarFileHeader
- mode_
: MotifScanMover
, myspace::GraftTester
- model
: job_manager.JobWindow
- model_cdrs_
: protocols::antibody::design::AntibodyDesignMoverGenerator
- model_group_
: utility::tag::XMLSchemaComplexType
- modeler_
: myspace::GraftTester
- modes
: TNM
- module_local_namespaces_to_add
: binder::Config
- module_local_namespaces_to_skip
: binder::Config
- module_name_
: basic::citation_manager::CitationCollection
, basic::citation_manager::UnpublishedModuleInfo
- module_type_
: basic::citation_manager::CitationCollection
, basic::citation_manager::UnpublishedModuleInfo
, InstantiateModulesBenchmark
- module_type_name_
: basic::citation_manager::CitationCollection
, basic::citation_manager::UnpublishedModuleInfo
- modules
: pyrosetta.distributed.viewer.core.Viewer
- monomer_nres_
: HDdesignMover
- monte_carlo
: SamplingManager
- mop
: MatchSet
- mOptions_
: utility::tag::Tag
- more_ancient_ptr
: utility::history_queue_struct
- more_recent_ptr
: utility::history_queue_struct
- motif_string_
: apps::pilot::frankdt::Motif
- motifs_list_
: MakeSegmentFileMPI
- movable_jumps_
: abbinding
, PhDocking
- move1_
: Arch
- move2_
: Arch
- move_sd_
: Bola
- movemap
: ShearMoverBenchmark
, SmallMoverBenchmark
- movemap_
: DomainAssemblerNDocker
, FloppyTailMover
, HECTMover
, MPDomainAssembly
, SymFixbbMover
, TestQuickRelaxMover
, TryScoreFilter
, zinc2_homodimer_design
, ZincMinimize
- movemap_bb_
: zinc2_homodimer_design
- movemap_lesstail_
: FloppyTailMover
- movemap_sc_
: zinc2_homodimer_design
- mover
: apps::pilot::KicSandbox
- mover_
: MoveThenFixH
, MoveThenFixHMin
, protocols::antibody::design::AntibodyDesignMoverGenerator
- moves
: schema.Job
- moves_
: TestQuickRelaxMover
- mpi_bcast_seed_from_node0_
: basic::random::RandomGeneratorSettings
- mpi_FileBuf_master_rank_
: utility::io::ozstream
- mpi_nprocs_
: utility::SimulateMPIData
- mpi_rank_
: basic::TracerImpl
- mpi_stream_p_
: utility::io::ozstream
- msg_
: ui::util::BadFileFormatException
, utility::excn::Exception
- msg_type_
: utility::SimulateMPIMessage
- msr1_
: zinc2_homodimer_design
- msr2_
: zinc2_homodimer_design
- msr_
: HbondZinc
, HbondZincBackbone
, zinc1_homodimer_design
, ZincMinimize
, ZincSiteEvaluator
- msr_1_
: zinc2_homodimer_setup
- msr_2_
: zinc2_homodimer_setup
- mtime
: utility::io::TarFileHeader
- multimer_
: InterfaceFeaturesTests
- multiproc_minimize
: erraser_option.erraser_option
- MUT_CUT_
: CrystDesign
- mut_gly_
: A3BHbsCreatorMover
- mutaa
: input_mutation
- mutant_index
: mutant_modeler.MutantModeler
- mutant_seqs
: mutant_modeler.MutantModeler
- mutant_subsets
: mutant_modeler.MutantModeler
- mutator_
: GlycomutagenesisProtocol
- mute_level_
: basic::TracerImpl
- muted
: basic::TracerOptions
- muted_
: basic::TracerImpl
- muted_by_default_
: basic::Tracer
, basic::TracerImpl
- mutrate_
: PerturbStruct
- mvTags_
: utility::tag::Tag
- my_designable_residues_
: protocols::jd2::RECONMPIJobDistributor
- my_model_
: RNA_ScoreMover
- my_mover_
: ZF_PatchupMover
- my_naming_func_
: utility::tag::XMLSchemaRepeatableCTNode
- my_picker
: PickSSE
- my_rank_
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- mycenterofmass_
: Results_Keeper
- myRDCs_
: RDCToolMover