- s -

s : basic::sampling::orientations::QuaternionGrid , detail::chrono_formatter< FormatContext, OutputIt, Rep, Period >
s1 : Hit
s1_ : ObjexxFCL::FArray2< T > , ObjexxFCL::FArray3< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray6< T >
s2 : Hit
s2_ : ObjexxFCL::FArray3< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray6< T >
s3_ : ObjexxFCL::FArray4< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray6< T >
s4_ : ObjexxFCL::FArray5< T > , ObjexxFCL::FArray6< T >
s5_ : ObjexxFCL::FArray6< T >
s_ : Base , utility::py::Value
sameSecondary_ : PairScore
sample_omega_for_pre_prolines_ : UniformPerturber
sampler : OutputManager
sampling_increment_ : zinc_stats::ZincStatisticGenerator
sampling_move : SamplingManager
sampling_move_ : BreadthMover
sampling_range_ : zinc_stats::ZincStatisticGenerator
sarray_ : ObjexxFCL::FArray1< T > , ObjexxFCL::FArray1A< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2< T > , ObjexxFCL::FArray2A< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::FArray< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
Sasa_ : CalcsTestMover , sasa_qdMover
sat_allow_ : ExposedStrandMover
save_all : pyrosetta.distributed.cluster.core.PyRosettaCluster
saxs_ : ComputeSAXSSpectrum
sc_bb_min_mover_ : zinc1_homodimer_design
sc_bb_move_map_ : zinc1_homodimer_design
SC_CUT_ : CrystDesign
sc_hbonds_ : Features
sc_min_mover_ : zinc1_homodimer_design
sc_move_map_ : zinc1_homodimer_design
sc_mover : JDtestmover
sc_prob_ : CenRotCanonicalMover
sc_sasa_ : Features
sc_temp_ave_ : Features
scaffold : APDBCMover
scaffold_name_ : HbondZincBackbone
scale_ : BondedRNA_Mover
scale_diag : numeric::nls::lm_control_struct
scattach_res_user : PoseWrap
scatter_factors_ : SimulateCryoMover
scfxn : HBondReporter
scfxn_ : RepackCenrotMover , RescoreCenrot
scheduler : pyrosetta.distributed.cluster.core.PyRosettaCluster , pyrosetta.distributed.cluster.utilities.SchedulerManager
schema_ : utility::tag::XMLValidatorImpl
schema_has_been_set_ : utility::tag::XMLValidatorImpl
schema_parser_context_ : utility::tag::XMLValidatorImpl
schema_validator_ : utility::tag::XMLValidatorImpl
score : Hit , InterfaceHit , LMAX , pseudoCA , pseudoCAbond , schema.Trajectory , SpacegroupHit
score_ : local_minimum , numeric::RocPoint , pseudoTrace , Results_Keeper , ScoreMover
score_data_ : GlycanClashCheckMover
score_file_ : ui::viewers::ScoreFileView
score_full_ : myspace::DataClass
score_function : SamplingManager
score_function_ : Benchmark , HemeBindingMover , HemeReplace , Minimize , NCMinimize , RamaTestMover , ScTrials
score_fxn : JDtestmover
score_fxn_ : A3BHbsCreatorMover
score_fxn_cart_ : A3BHbsCreatorMover
score_map_ : RamaTestMover , ScTrials
score_name : SamplingManager
score_terms_ : ui::viewers::ScoreFileView
score_type_ : ScoreEachBenchmark , ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget
scored : myspace::DataStruct
scorefile_ : RamaTestMover , ScTrials
scorefile_name : pyrosetta.distributed.cluster.core.PyRosettaCluster
scorefile_path : pyrosetta.distributed.cluster.core.PyRosettaCluster
scorefunction_ : zinc2_homodimer_setup
scorefxn : MinimizerBenchmark< sft, TScale > , pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor , pyrosetta.toolbox.py_jobdistributor.PyJobDistributor , test.T010_LoadPDB.LoadPDBTest
scorefxn_ : BacksideHbondFinderMover , CalcIrms , CalcsTestMover , CenRotCanonicalMover , CountContact , DeleteSegments , dsRNA_grow , ExposedStrandMover , ExtractATD , FastRelaxPerformanceBenchmark , HDdesignMover , HDmakerMover , IAMover , InteractionGraphPerformanceBenchmark , InterfaceStrandFinderMover , LocalRmsd , MinPackMinMover , MotifScanMover , myspace::GraftTester , PepMinMover , PerturbStruct , Protocol_MolecularDynamics , protocols::antibody::design::AntibodyDesignMoverGenerator , RescorePDDF , RescoreSAXS , RotateSAXS , RTminOptMultifunc , ScoreEachBenchmark , SmoothFragRepackMover , SymFixbbMover , XMLprinterMover , ZincMinimize , ZincSiteEvaluator
scorefxn_a : HDdesignMover , SymFixbbMover
scorefxn_centroid_ : Foldptn , PickBAB
scorefxn_cst_ : CaToAllAtom
scorefxn_dock_ : CenRotDockingMover , CenRotRBRelaxMover
scorefxn_fullatom_ : Foldptn , PickBAB
scorefxn_min_ : CenRotRelaxMover
scorefxn_repack_ : CenRotDockingMover , CenRotRBRelaxMover , CenRotRelaxMover
scorefxn_zn_ : ZincMinimize
scoreName : pyrosetta.EnergyMethod
scores : myspace::DataStruct , pyrosetta.distributed.packed_pose.core.PackedPose
scores_ : SomeThing
scores_1b : FragmentAssemblyMover
scores_1b_ : FragMonteCarlo
scores_2b : FragmentAssemblyMover
scores_2b_ : FragMonteCarlo
scoresum : InterfaceHit
scoreType : pyrosetta.EnergyMethod
scoring_file : erraser_option.erraser_option
scratch_ : HBondedPairIterator
scratch_dir : pyrosetta.distributed.cluster.core.PyRosettaCluster
scripts : job_manager.CommandManager
sd : DCST , pep_coord_cst
sd_ : AbsFunc
sdata : pyrosetta.io.silent_file_map.SilentFileEnergyAccessor , pyrosetta.io.silent_file_map.SilentFileMap , pyrosetta.io.silent_file_map.SilentFilePoseAccessor
sdev_ : InteractionDistMinimizer
search_paths_ : basic::resource_manager::locator::FileSystemResourceLocator
search_syn_pyrimidine_only_when_native_syn : erraser_option.erraser_option
second_node_ind_ : utility::graph::LowMemEdge
second_res : basic::datacache::ResRotPair
second_rot : basic::datacache::ResRotPair
secondary_structs_ : apps::pilot::frankdt::Motif
seconds : pyrosetta.distributed.utility.log.ProgressLogger
secret : PyMOL-Rosetta-relay-client.SecretInputDialog
secret_line_edit : PyMOL-Rosetta-relay-client.SecretInputDialog
secstruct_ : apps::pilot::AlignChunkMover
seed_ : basic::random::RandomGeneratorSettings , numeric::random::standard_RG
seed_offset_ : basic::random::RandomGeneratorSettings
seeds : pyrosetta.distributed.cluster.core.PyRosettaCluster
segment_file_path_ : MakeSegmentFileMPI
segments_region_ : DeleteSegments
semi_constructed_expression_ : numeric::expression_parser::ExpressionCreator
senior_authors_ : basic::citation_manager::Citation
sep : arg_join< It, Sentinel, Char > , DisulfEpos , PairScore , tuple_arg_join< Char, T >
sep_ss_ : RDF_Mover
seq : ConstraintConfig
seqpos1_ : SameResidueTypeConstraint
seqpos2_ : SameResidueTypeConstraint
seqpos_ : CloseContactWithResidue , InterfaceDDGMutationTask , MotifScanMover
seqpos_alignments_ : ChallengeMover
seqpos_start_ : apps::pilot::AlignChunkMover
seqpos_stop_ : apps::pilot::AlignChunkMover
seqs_ : PrintSequenceMover
sequence : pyrosetta.toolbox.py_jobdistributor.PyJobDistributor
sequence_ : DomainAssemblerNDocker , protocols::abinitio::ApplicationContext , protocols::abinitio::JumpSpecificAbrelax , SecondaryStructureChunk , TryScoreFilter , ui::task::FunctorASyncSequence , ui::task::FunctorSequence , utility::CSI_Sequence
sequence_alignment_ : apps::pilot::AlignChunkMover
sequence_alignment_local_ : apps::pilot::AlignChunkMover
sequence_alignments_ : apps::pilot::MultiTemplateAlignChunkMover
sequence_position_start_ : SecondaryStructureChunk
sequences_ : MPDomainAssembly
serializer : pyrosetta.distributed.cluster.core.PyRosettaCluster
server_modification_time_ : ui::task::Node
server_port_ : ServerInfo
server_url_ : ServerInfo
serverinfo_ : RosettaBackend , RosettaJob
session_factory : job_manager.JobWindow
set_as_mover_ : protocols::antibody::design::AntibodyDesignMoverGenerator
set_background_color : text_style
set_data_ : ui::task::Node
set_fail_bad_input_ : JDtestmover
set_fail_no_retry_ : JDtestmover
set_foreground_color : text_style
set_ios_hook : pyrosetta.logging_support.PythonLoggingSink , test.T007_TracerIO.MyPyTracer
set_tf_ : protocols::antibody::design::AntibodyDesignMoverGenerator
setting_ : Spacegroup
setup_ : CrystDesign
setup_successful_ : ScoreEachBenchmark
sf : test.T300_PyJobDistributor.TestPyJobDistributor
sf3 : HubDenovo
sf_ : DesignGlycansProtocol , DockGlycansProtocol , GlycomutagenesisProtocol , MoveThenFixH , RosettaHolesMover , ScMinMover
sf_sugar_only_ : GlycomutagenesisProtocol
sfasym : HubDenovo
sfd_out : DomainAssemblerNDocker
sformat : numeric::random::mt19937_RG
sformat_idx : numeric::random::mt19937_RG
sfsym : HubDenovo
sfsymnocst : HubDenovo
sfxn : mutant_modeler.MutantModeler
sfxn_ : InterfaceDDGMover , MainWindow , MPDomainAssembly , MPInterfaceStatistics , MyScoreMover , NBuriedUnsatsCalcultor , Packing_energies , protocols::jd2::RECONMPIJobDistributor , RNA_ScoreMover , ScoreFunctionFingerprintMover , SSM_energies , TestQuickRelaxMover
sg : SpacegroupHit
sg_ : CrystFFTDock
sha1 : pyrosetta.distributed.cluster.core.PyRosettaCluster
shallow_copy_ : basic::datacache::CacheableResRotPairFloatMap
shape_ : numeric::VoxelArray< _Float, _Value >
shear_mover : ShearMoverBenchmark
shear_mover_ : DockGlycansProtocol
sheet_descriptions_ : DomainDescription
sheet_start_ : HDmakerMover
sheet_stop_ : HDmakerMover
shift : latticeHit
shift_ : ObjexxFCL::FArray1< T > , ObjexxFCL::FArray1A< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2< T > , ObjexxFCL::FArray2A< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3< T > , ObjexxFCL::FArray3A< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4< T > , ObjexxFCL::FArray4A< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5< T > , ObjexxFCL::FArray5A< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6< T > , ObjexxFCL::FArray6A< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray6P< T > , ObjexxFCL::FArray< T > , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T >
shift_pH_ : PhProtocol
short : options_class.Option
short_description_ : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
shorter_interval_tie_lower_threshold : detail::dragonbox::float_info< double > , detail::dragonbox::float_info< float >
shorter_interval_tie_upper_threshold : detail::dragonbox::float_info< double > , detail::dragonbox::float_info< float >
show_accessed_options_ : utility::options::OptionCollection
show_unused_options_ : utility::options::OptionCollection
showpoint : detail::float_specs
shrinking : svm_parameter
si : Solver_NU
sic_ : TCDock
sics_ : SlideTask
sicscore : Hit
side_inv_ : ClashCheck , MatchSet
side_length : test.Workshop9_my_shapes.MySquare
sidechain_mover : SamplingManager
sidechain_weight_ : NativeEnsemble
sidechainmover_ : CenRotCanonicalMover
sigma : basic::sampling::orientations::QuaternionGrid
sign : basic_format_specs< Char > , detail::float_specs , SVR_Q
significand : detail::big_decimal_fp , detail::dragonbox::decimal_fp< T >
significand_bits : detail::dragonbox::float_info< double > , detail::dragonbox::float_info< float >
significand_size : detail::big_decimal_fp , detail::fp
signs : detail::basic_data< T >
silent_index : PoseAndData
silent_pose : schema.Trajectory
silent_score_file_ : protocols::abinitio::JumpSpecificAbrelax
silents : myspace::DataStruct
silentScoreFile_ : protocols::abinitio::ApplicationContext
simulation_ : utility::SimulateMPI
simulation_name : pyrosetta.distributed.cluster.core.PyRosettaCluster
simulation_records_in_scorefile : pyrosetta.distributed.cluster.core.PyRosettaCluster
sin_alpha_ : Arch , TCDock
single_helix : Dock
single_line_arrays_ : utility::json_spirit::Generator< Value_type, Ostream_type >
size : Cache , detail::fixed_handler , detail::named_arg_value< Char > , detail::string_value< Char > , detail::write_int_data< Char > , format_to_n_result< OutputIt > , utility::io::TarFileHeader
size_ : basic::database::schema_generator::DbDataType , basic_string_view< Char > , detail::buffer< T > , detail::fill_t< Char > , numeric::ClusteringTreeNode , numeric::kdtree::KDTree , numeric::MathMatrix< T > , numeric::MathNTensor< T, N > , numeric::MathTensor< T > , numeric::MathVector< T > , ObjexxFCL::CArray< T > , ObjexxFCL::CArrayP< T > , ObjexxFCL::Chunk< T > , ObjexxFCL::ChunkVector< T > , ObjexxFCL::FArray1D< T > , ObjexxFCL::FArray2D< T > , ObjexxFCL::FArray3D< T > , ObjexxFCL::FArray4D< T > , ObjexxFCL::FArray5D< T > , ObjexxFCL::FArray6D< T > , ObjexxFCL::FArray< T > , ObjexxFCL::FArraySection< T > , ObjexxFCL::IndexRange , ObjexxFCL::KeyFArray1D< T > , ObjexxFCL::KeyFArray2D< T > , ObjexxFCL::KeyFArray3D< T > , ObjexxFCL::KeyFArray4D< T > , ObjexxFCL::KeyFArray5D< T > , ObjexxFCL::KeyFArray6D< T > , utility::graph::Array0< T > , utility::graph::RingSizeVisitor< Graph, DistanceMap, LabelMap >
size_iter_ : TwoChainInterface , TwoChainTenANeighbors
size_msg_ : utility::SimulateMPIMessage
sized : myspace::DataStruct
sizes_msg_ : utility::SimulateMPIMessage
skip_ : LocalRmsd
skip_hd_docking_ : HDdesignMover
skip_line_number : binder::Config
skip_minimize : erraser_option.erraser_option
skip_scoring_ : MyScoreMover
skip_single_res_minimize : erraser_option.erraser_option
skipping_requested_ : binder::Binder
slice_nearby : erraser_option.erraser_option
slide_ : MySlideMover
slider_ : DockGlycansProtocol
slope : numeric::interpolation::spline::LinearFunction
sm_ : Foldptn
small_divisor : detail::dragonbox::float_info< double > , detail::dragonbox::float_info< float >
small_mover : SmallMoverBenchmark
small_mover_ : DockGlycansProtocol , GlycomutagenesisProtocol
smart_held_classes : binder::Config
smooth_trial_small_pack_ : SmoothFragRepackMover
sms_ : SmoothFragRepackMover
so3_ : numeric::fourier::SHT
socket : PyMOL-Rosetta-relay-client.PR_UDPServer , PyMOL-RosettaServer.PR_UDPServer , pyrosetta.network.rosetta_udp_to_tcp_bridge.PR_UDPServer , pyrosetta.PyMOLRosettaServer.PR_UDPServer
socket_address : pyrosetta.distributed.cluster.logging_filters.SetSocketAddressFilter , pyrosetta.distributed.cluster.logging_filters.SocketAddressFilter
socket_listener : pyrosetta.distributed.cluster.logging_support.LoggingSupport
socket_listener_address : pyrosetta.distributed.cluster.logging_listeners.SocketListener
soft_clash_percent_ : GlycanClashCheckMover
softrep : DesignOpts
softrep_min_mover_ : zinc1_homodimer_design
softrep_sym_scorefxn_ : zinc1_homodimer_design
sol_mult_ : DockGlycansProtocol
source_ : ObjexxFCL::FArray1P< T > , ObjexxFCL::FArray2P< T > , ObjexxFCL::FArray3P< T > , ObjexxFCL::FArray4P< T > , ObjexxFCL::FArray5P< T > , ObjexxFCL::FArray6P< T >
source_residues : pyrosetta.protocols.structure_search.StructureSearchManager
sources_ : ObjexxFCL::internal::ObserverGraph
spacing : WorkDat
sparta_ : SpartaSuperDeviationMover
sparta_scores_ : SpartaSuperDeviationMover
species_name_ : GlycomutagenesisProtocol
specs : detail::format_part< Char >::replacement , detail::int_writer< OutputIt, Char, UInt > , formatter< std::chrono::duration< Rep, Period >, Char >
specs_ : detail::arg_formatter_base< OutputIt, Char, ErrorHandler > , detail::dynamic_specs_handler< ParseContext > , detail::printf_width_handler< Char > , detail::specs_setter< Char > , dynamic_formatter< Char > , formatter< bytes > , formatter< T, Char, enable_if_t< detail::type_constant< T, Char >::value !=detail::type::custom_type > >
sph_rank : FragID
spline_interpolator_ : numeric::interpolation::Histogram< X, Y >
split_axis_ : numeric::kdtree::KDNode
sql_command_ : basic::resource_manager::locator::DatabaseResourceLocator
sqp : MatchAlignInfo
sqrtTwoPi : DisulfideBondEnergy
src_ : utility::SimulateMPIMessage
src_2_dst_ : utility::subset_mapping
ss : ConstraintConfig
ss1 : DisulfEpos
ss2 : DisulfEpos
ss_ : PoseWrap , SecondaryStructureChunk
ss_chunks_pose_ : apps::pilot::CustomStarTreeMover , apps::pilot::SampleSecondaryStructureAlignmentMover
ss_chunks_target_ : ChallengeMover
ss_def_ : protocols::abinitio::JumpSpecificAbrelax , protocols::jumping::LibraryJumpSetup , protocols::jumping::SpecificJumpSetup
ss_E_counts_ : JDmover
ss_H_counts_ : JDmover
ss_info_ : DomainDescription
ss_L_counts_ : JDmover
ss_only_ : CrystFFTDock
ss_pref_ : PoseWrap
ss_suff_ : PoseWrap
ssamp_ : SlideTask
sse_dist : PickSSE
sse_end : PickSSE
sse_start : PickSSE
SSE_topo_ : MPFoldingMover
sse_type : PickSSE
ssinfo_ : Foldptn , PairDistance , PickBAB
ssinput_ : Foldptn , PairDistance , PickBAB
ssmap : ConstraintConfig
stack_ : binder::IncludeSet , utility::json_spirit::Semantic_actions< Value_type, Iter_type >
start : enumerate_junctions.Component
start_ : BBMover , Domain , FloppyTailMover , numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::CubicSpline , numeric::interpolation::spline::PolycubicSpline< N > , numeric::interpolation::spline::PolycubicSpline< 1 > , numeric::interpolation::spline::PolycubicSpline< 2 > , numeric::interpolation::spline::TricubicSpline , numeric::MultiDimensionalHistogram , SimpleBBMover
start_clock_ : basic::DynamicProfileThis
start_coord_csts_ : protocols::antibody::design::AntibodyDesignMoverGenerator
start_from_poly_ala_ : ComputeProfileMover
start_pose : DockingBenchmark< dock, TScale > , MinimizerBenchmark< sft, TScale >
start_res_list_ : ExposedStrandMover
start_time : pyrosetta.distributed.utility.log.ProgressLogger , schema.Job
start_time_ : TCDock
started_ : Bola
starting_centroid_pose_ : zinc1_homodimer_design
starting_fullatom_pose_ : zinc1_homodimer_design
starting_monomer_pose_ : zinc1_homodimer_design
starting_pose_ : HbondZinc , HbondZincBackbone , UBQ_E2Mover , UBQ_GTPase_disulfide_Mover
STARTING_RAMP_DOWN_FACTOR : DockGlycansProtocol
STARTING_RAMP_UP_FACTOR : DockGlycansProtocol
startingPose_ : protocols::abinitio::ApplicationContext
startres : HelixHit
starts_ : MyRotMover
state : ui::task::ProjectTasksModel::Row
state_ : ObjexxFCL::FArrayInitializer< T, Array > , StatefulMover , ui::task::Functor , ui::task::Task , utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
states_ : numeric::fourier::kiss_fftnd_state
static_int_ : utility::py::PyExitCallback
static_public_Integral : Consts
static_string_ : utility::py::PyExitCallback
static_string_const_ : utility::py::PyExitCallback
status_ : numeric::RocPoint
status_code_ : ui::task::NetworkCall
status_list : job_manager.StatusWindow
status_window : job_manager.CommandRunner , job_manager.CommandWindow
stb_ : FunGroupTK , RotSel
stdevNeg : DisulfideBondEnergy
stdevPos : DisulfideBondEnergy
steepness_ : ScoreFragmentSetMover
step_ : numeric::interpolation::Histogram< X, Y > , RotateSAXS
stepbound : numeric::nls::lm_control_struct
stop_ : BBMover , FloppyTailMover , SimpleBBMover
stop_level_ : utility::graph::RingSizeVisitor< Graph, DistanceMap, LabelMap >
stop_time : schema.Job
stopres : HelixHit
stops_ : MyRotMover
store_ : basic_memory_buffer< T, SIZE, Allocator >
store_pdbs_ : MakeSegmentFileMPI
str : detail::format_part< Char >::value , pyrosetta.distributed.cluster.io.IO
str_ : basic::datacache::CacheableString , format_int , ObjexxFCL::Cstring , ObjexxFCL::Fstring
strand_def_vector_ : ExposedStrandMover
strand_pose_nums_ : ExposedStrandMover
stream_ : basic::resource_manager::locator::FileStream , basic::resource_manager::locator::NullStream , basic::resource_manager::locator::StringResourceStream
strict_ : MetalSiteFinderMover , utility::Bound< T >
string : detail::value< Context >
string_ : utility::json_spirit::Json_grammer< Value_type, Iter_type >::definition< ScannerT >
string_msg_ : utility::SimulateMPIMessage
string_value_ : utility::py::Base
string_vectors_ : utility::options::OptionCollection
strings_ : utility::options::OptionCollection
struct_filename_ : ExposedStrandMover
structures_ : SetOfClusters
stub : Hit
style : pyrosetta.distributed.viewer.modules.setStyle
sub_ : ObjexxFCL::Fstring
subelement_behavior_ : utility::tag::XMLSchemaComplexTypeGeneratorImpl
subelement_sets_ : utility::tag::XMLSchemaComplexTypeGeneratorImpl
subelements_ : utility::tag::XMLSchemaComplexTypeGeneratorImpl
subscribers_ : ui::task::Updater
substate_ : numeric::fourier::kiss_dct_state , numeric::fourier::kiss_fftr_state , numeric::fourier::kiss_fftsplit_state
substitution_group_ : utility::tag::XMLSchemaElement
substructure_id : node_data
subsub_ends_ : PoseWrap
subsub_fixed_begin : PoseWrap
subsub_fixed_end : PoseWrap
subsub_starts_ : PoseWrap
subunit_tolerance_ : DetectSymmetry
subwidgets_ : ui::ui_protocols::helical_bundle::HelicalBundleDialogueWidget
super_twiddles_ : numeric::fourier::kiss_dct_state , numeric::fourier::kiss_fftr_state
superimpose_ : SuperDeviationMover
surface_ : Sasa
surface_type : pyrosetta.distributed.viewer.modules.setSurface
surname_ : basic::citation_manager::AuthorNames
SV : svm_model
sv_coef : svm_model
sv_indices : svm_model
svm_model_ : utility::libsvm::Svm_rosetta
svm_type : svm_parameter
sym : Hit
sym_minmover_ : zinc2_homodimer_design
sym_minmover_bb_ : zinc2_homodimer_design
sym_minmover_sc_ : zinc2_homodimer_design
sym_pack_mover_ : zinc1_homodimer_design , zinc2_homodimer_design
sym_rottrials_mover_ : zinc1_homodimer_design
sym_scorefxn_ : zinc1_homodimer_design
symjumps : MyRotMover , MyTransMover
symm_data : PoseWrap
symm_data_full : PoseWrap
symm_min_ : SwapElementsMover2
symmops : pointGroupHit
symmops_ : Spacegroup
symop_expansion : fiberHit
symop_fiber : fiberHit
symtype_ : TCDock
syncer_ : ui::task::Task
syncing_ : ui::task::Node
syncing_progress_ : ui::task::Task
system_info : pyrosetta.distributed.cluster.core.PyRosettaCluster