- a -

• ALLOWED_DOFS : plot_scoreterm.cc

- c -

• CapriScoreType : capri15_scoring.hh
• color : color.h

- d -

• DockType : Docking.bench.hh

- e -

• E1 : T01.enum.hpp , T60.custom_shared.hpp , T61.smart_holder.hpp
• E2_struct : T01.enum.hpp , T60.custom_shared.hpp , T61.smart_holder.hpp
• E3_class : T01.enum.hpp , T60.custom_shared.hpp , T61.smart_holder.hpp
• E4_not_binded : T01.enum.hpp
• E6_class_not_binded : T01.enum.hpp
• emphasis : color.h

- f -

• fast_relax_perf_benchmark : FastRelax.bench.hh

- i -

• Index : InterfaceMutMaker.cc , exposed_strand_finder.cc , homodimer_design.cc
• interaction_graph_perf_benchmark : InteractionGraph.bench.hh

- k -

• KRSQueryType : FunGroupTK.cc

- m -

• MatchPosition : MetalInterface.hh , zinc_heterodimer_design.cc
• ModuleType : InstantiateModules.bench.hh

- r -

• RTYPE : hczndimer.cc

- s -

• ScoreFnType : Minimizer.bench.hh
• SpacegroupSetting : spacegroup.hh

- t -

• terminal_color : color.h

- u -

• UATOM : gpu_homog_atom_coords.h , unique_atoms.h