- w -

• wait_for_gdb() : batchrelax_mpi.cc
• water_test() : dna_spec_test.cc , simple_dna_regression_test.cc
• water_test_fixed_O() : dna_spec_test.cc , simple_dna_regression_test.cc
• weights() : score_ddgs.cc
• which_subsub() : matdes_design_2comp.cc
• Wrap360() : atom_id_demo.cc
• wrap_CXXRecordDecl() : main.cpp
• WrapPosNeg180() : atom_id_demo.cc
• WrapPosNegPI() : atom_id_demo.cc
• WrapTwoPI() : atom_id_demo.cc
• wriggle_test() : dna_spec_test.cc , simple_dna_regression_test.cc
• write_AHD_to_db() : sweep_respair_energies.cc
• write_ahdist_to_db() : sweep_respair_energies.cc
• write_BAH_to_db() : sweep_respair_energies.cc
• write_base_pair_step_to_silent_struct() : rna_database.cc
• write_buns_and_dots_kinemage() : find_buns.cc
• write_checkpoint() : fold_from_loops_devel.hh , fold_from_loops.hh
• write_chi_to_db() : sweep_respair_energies.cc
• write_cluster_frags() : r_frag_quality.cc
• write_distances() : kcluster.cc
• write_for_resnum() : extract_CA_coords.cc
• write_hbgeom_to_db() : sweep_respair_energies.cc
• write_hbgeom_types_to_database() : sweep_respair_energies.cc
• write_hbgeoms_to_database() : sweep_respair_energies.cc
• write_new_respair_to_database() : sweep_respair_energies.cc
• write_output_files() : kcluster.cc
• write_parameters_to_std_out() : optE_test.cc
• write_respair_scores_to_database() : sweep_respair_energies.cc
• write_schema_to_db() : features_database_schema.cc
• write_score_types_to_database() : sweep_respair_energies.cc
• write_scores_and_hbond_geoms_to_database() : sweep_respair_energies.cc
• write_to_restype_file() : calculate_distances.cc
• write_weights_to_db() : roc_optimizer.cc
• writeScores() : CycDsulf.cc
• writeYamlValue() : ddg_benchmark.cc , design_contrast_and_statistic.cc