Here is a list of all file members with links to the files they belong to:

- j -

• j : draw_gen_env_dep_pair.m , draw_gen_env_dep_pair_decompose.m , draw_matrix.m , gen_env_dep_orient.m , gen_env_dep_orient_decompose.m , gen_env_dep_orient_draw.m , gen_env_dep_pair.m , gen_env_dep_pair_decompose.m , draw_gen_env_dep_orient_decompose.m
• jacobi() : RDCTest.cc
• JDmoverOP : decoy_features.cc
• JDtestmoverOP : jd2test.cc
• jitter_and_minimize() : make_ideal_betapeptide.cc , test_KIC_betapeptide.cc
• jitterloop() : design_truecycpeptide_fromstub.cc
• jj : draw_gen_env_dep_pair_decompose.m , cal_env.m
• join() : format.h , ranges.h , format.h
• journal_club_syn_chi() : parin_test.cc
• JSON_SPIRIT_MVALUE_ENABLED : json_spirit_value.h
• JSON_SPIRIT_VALUE_ENABLED : json_spirit_value.h
• JSON_SPIRIT_WMVALUE_ENABLED : json_spirit_value.h
• JSON_SPIRIT_WVALUE_ENABLED : json_spirit_value.h
• juke_sam_pos() : capri15.cc
• juke_sam_test() : rna_protein_test.cc
• jumpnum : simple_interfaceanalyzer.cc , InterfaceAnalyzer.cc
• jumps_to_root() : smhybrid.cc