Here is a list of all file members with links to the files they belong to:

- n -

• N() : gen_env_dep_pair_decompose.m , draw_gen_env_dep_pair.m , gen_env_dep_pair_decompose.m , gen_env_dep_pair.m , draw_gen_env_dep_pair_decompose.m , draw_gen_env_dep_pair.m , draw_gen_env_dep_pair_decompose.m , gen_env_dep_pair.m , gen_env_dep_pair_decompose.m , gpu_homog_atom_coords.h , unique_atoms.h , draw_gen_env_dep_pair.m , draw_gen_env_dep_pair_decompose.m
• n_experimental_constraint_scores : capri15_scoring.hh
• n_ints : SID_rescore.cc
• n_key : KeyLookup.functors.hh , KeyLookup.functors.ii
• n_mov() : pep_spec_flx.mov.cc
• N_OMG_BINS() : peptoid_rotlib_test2.cc
• N_PHI_BINS() : peptoid_rotlib_test2.cc
• N_PSI_BINS() : peptoid_rotlib_test2.cc
• n_rots : parcs_ccs_calc.cc
• n_terminal_component_list : steric_fusion_scan.cc
• n_terminal_range : steric_fusion_scan.cc
• n_total : cenrot_jd2.cc , fa_to_cenrot_score.cc
• Na1_r_core_core : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• Na1_r_core_surf : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• Na1_r_surf_core : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• Na1_r_surf_surf : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• Na2_r_core_core : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• Na2_r_core_surf : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• Na2_r_surf_core : gen_env_dep_orient_decompose.m , draw_gen_env_dep_orient_decompose.m
• Na2_r_surf_surf : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• NAA : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient_decompose.m
• Nall : gen_vdw_radius.m , gen_vdw_radius_soft.m
• name : Tag.cc
• name2elt() : density_tools.cc
• name_and_options : Tag.cc
• name_or_quote : Tag.cc
• NaN : functions.cc
• nat_list_opkey : buns.cc , sasa_buns.cc , read_l_print_pdbinfo.cc
• native_cos() : gpu_mat_vec.hh
• native_divide() : gpu_mat_vec.hh
• native_frag_CA_RMSD() : rms_util.hh
• native_recip() : CL.hh
• native_sin() : gpu_mat_vec.hh
• native_sqrt() : gpu_mat_vec.hh
• NativeEnsembleCOP : native_ensemble.cc
• NativeEnsembleOP : native_ensemble.cc
• natoms() : coiled_coil.cc , coiled_coil_zn.cc
• nbrs_per_residue : AnchorFinder.cc
• Nc : gen_vdw_radius.m , gen_vdw_radius_soft.m
• nc_score() : HDXEnergy.cc
• Ncut : pre_fill_dfire.m , pre_fill_dfire_2D.m
• ncycles : peptide_minimizer.cc
• ND1_H : gpu_homog_atom_coords.h , unique_atoms.h
• ND2_N : gpu_homog_atom_coords.h , unique_atoms.h
• ndx : gen_vdw_radius.m , gen_vdw_radius_soft.m
• NE1_W : gpu_homog_atom_coords.h , unique_atoms.h
• NE2_H : unique_atoms.h , gpu_homog_atom_coords.h
• NE2_Q : gpu_homog_atom_coords.h , unique_atoms.h
• NE_R : gpu_homog_atom_coords.h , unique_atoms.h
• near_chain() : design_truecycpeptide_fromstub.cc
• nearlyEqual() : density_res_zscores.cc
• neighbor_count() : gensym_3bpy_from_dimer.cc , symdock_enum_3_1.cc
• neighbor_dist : detect_tight_clusters.cc
• neighborWeight() : hydrophobic_patch_stats_calculator.cc
• NEW_OPT() : cenrot_jd2.cc , option_macros.hh , cenrot_jd2.cc
• NEW_OPT10 : option_macros.hh
• NEW_OPT2 : option_macros.hh
• NEW_OPT3 : option_macros.hh
• NEW_OPT4 : option_macros.hh
• NEW_OPT5 : option_macros.hh
• NEW_OPT6 : option_macros.hh
• NEW_OPT7 : option_macros.hh
• NEW_OPT8 : option_macros.hh
• NEW_OPT9 : option_macros.hh
• new_pose_generator() : fold_from_loops.cc
• new_sc() : will_mutalyze.cc , des_pos_ddG.cc , rescore_i213.cc , pentcb_design.cc , gensym_3bpy_from_dimer.cc , matdes_mutalyze.cc , matdes_design_2comp.cc , matdes_design.cc , design_symm_110330_good.cc , design_symm.cc , cxdesign.cc
• newer_sc() : matdes_mutalyze.cc
• NH1_R : gpu_homog_atom_coords.h , unique_atoms.h
• NH2_R : gpu_homog_atom_coords.h , unique_atoms.h
• Nint : gen_vdw_radius.m , gen_vdw_radius_soft.m , gen_vdw_radius.m , gen_vdw_radius_soft.m
• no_interpolate_Mpair() : mp_parameters.cc
• noclash() : design_truecycpeptide_fromstub.cc
• NODISCARD_ATTR : cxx_versioning_macros.hh
• non_chain_coords() : sym_multicomp_test.cc
• non_helix() : mp_parameters.cc
• nonidcen_counts() : gen_vdw_radius.m , gen_vdw_radius_soft.m
• NORETURN_ATTR : cxx_versioning_macros.hh
• norm4() : cryst_design.cc , cryst_gen.cc
• norm_degrees() : gen_trimer_disulf.cc
• normal : mp_parameters.cc
• normal_angle_delta : mp_parameters.cc
• normal_angle_start : mp_parameters.cc
• normal_search_cycles : mp_parameters.cc
• normal_start : mp_parameters.cc
• normalize_info() : get_info.cc
• normalize_res_freqs() : pep_opt.cc , pep_opt_parallel.cc
• normalize_residue_sasa() : byres_data.cc
• normalizedf() : gpu_mat_vec.hh
• normalizedv() : gpu_mat_vec.hh
• normalizevector() : make_a3b_bundle.cc , make_betahelicalbundle.cc , make_helicalbundle.cc
• NOSETTING : spacegroup.hh
• nosuper_CA_rmsd() : rms_util.hh
• not1_loop_test() : dna_spec_test.cc , simple_dna_regression_test.cc
• not1_test() : dna_spec_test.cc , simple_dna_regression_test.cc
• not_main() : atom_id_demo.cc
• Nr : gen_vdw_radius.m , gen_vdw_radius_soft.m
• Nr_core_core : draw_gen_env_dep_pair_decompose.m , gen_env_dep_pair_decompose.m
• Nr_core_surf : draw_gen_env_dep_pair_decompose.m , gen_env_dep_pair_decompose.m
• Nr_surf_core : draw_gen_env_dep_pair_decompose.m , gen_env_dep_pair_decompose.m
• Nr_surf_surf : draw_gen_env_dep_pair_decompose.m , gen_env_dep_pair_decompose.m
• nrecovery : cenrot_jd2.cc , fa_to_cenrot_score.cc
• Nrm : gen_vdw_radius_soft.m , gen_vdw_radius.m
• NRTYPES : hczndimer.cc
• nsat() : lig_polar_sat.cc
• NSS : CXdock_TMP.cc , d3_bpy_linker.cc , dxdock_movie.cc , pentcb.cc , pentcb_test.cc
• nstruct_iterations : zinc2_homodimer_design.cc , zinc1_homodimer_design.cc
• ntype : draw_gen_env_dep_orient_decompose.m , gen_env_dep_orient.m , gen_env_dep_orient_decompose.m , gen_env_dep_orient_draw.m
• NU_SVC : Svm.hh
• NU_SVR : Svm.hh
• nucleobase_probe_score_test() : nucleobase_sample_around.cc
• nucleoside_sampling() : turner_two_chain.cc
• Nucleoside_Torsion : turner_two_chain.cc
• num_chains() : phil.hh
• num_nbrs() : score_ddgs.cc
• num_res_env() : gen_env_dep_pair.m , gen_env_dep_pair_decompose.m , gen_env_dep_orient_draw.m , gen_env_dep_orient_decompose.m , gen_env_dep_orient.m , draw_matrix.m , draw_gen_env_dep_pair_decompose.m , draw_gen_env_dep_pair.m , gen_env_dep_pair.m , gen_env_dep_orient_draw.m , gen_env_dep_orient_decompose.m , gen_env_dep_orient.m , draw_matrix.m , draw_gen_env_dep_pair.m , draw_gen_env_dep_orient_decompose.m
• num_threads() : gensym_3bpy_from_dimer.cc , heterodock.cc , helix_assembly.cc , dxdock_movie.cc , d3_bpy_linker.cc , CXdock.cc
• NUM_THREADS : test_multithreaded_pdb_load.cc
• NUM_TRIALS_FOR_THRESHOLD : calibur.cc
• num_trimer_contacts() : gensym_3bpy_from_dimer.cc
• NUMBER_OF_NUMBERS : test_rosetta_thread_manager_advanced_API.cc
• numlist : load_angle_r_table.m , load_pair_env_table.m
• NV_P : gpu_homog_atom_coords.h , unique_atoms.h
• NZ_K : gpu_homog_atom_coords.h , unique_atoms.h