- p -

• PackingAngleOP : packing_angle.cc
• PairDistanceOP : pair_distance.cc
• ParameterList : kic_bug.cc
• ParameterMatrix : kic_bug.cc
• PeptiodMovieMoverCOP : peptoid_movie.cc
• PeptiodMovieMoverOP : peptoid_movie.cc
• PeptoidDesignMoverCOP : peptoid_design.cc
• PeptoidDesignMoverOP : peptoid_design.cc
• PeptoidDihedralGrabberOP : cyclic_pack.cc , get_dihedral_peptide.cc , get_dihedral_peptoid.cc
• PeptoidRotamerRecovererOP : peptoid_rotamer_prediction_benchmark.cc
• PhDockingOP : pH_docking.cc
• PhProtocolOP : pH_neighbor_pack.cc , pH_protocol.cc
• PickBABOP : pick_bab.cc
• point : zinc2_homodimer_setup.cc , zinc2_homodimer_design.cc , zinc1_homodimer_setup.cc , zinc1_homodimer_design.cc , ZincMatchFilter.cc , ZincSiteEvaluator.cc , ZincMinimize.cc , xtal_water_bunsat.cc , khXtal_water_bunsat.cc
• Pose : zinc2_homodimer_design.cc , zinc2_homodimer_setup.cc , zinc1_homodimer_design.cc , supercharge.cc , score_hotspot_cst.cc , lowresdock_patchdock_hotspot_cst.cc , hotspot_stub_constraint_test.cc , ZincSiteEvaluator.cc
• PoseList : stepwise_centroid_test.cc
• PoseWrapAP : smhybrid.cc
• PoseWrapCAP : smhybrid.cc
• PoseWrapCOP : smhybrid.cc
• PoseWrapOP : smhybrid.cc
• printf_args : printf.h
• printf_context : printf.h
• PrintSequenceMoverOP : jseq.cc