- u -

• UBQpdb : UBQ_UBQ_E2.cc
• uniforms : test_leerichards.cc
• usage_string : sequencerecovery.cc , analyze_ddG.cc , find_position_matches_using_inverse_rotamers.cc , rss_energy_calculator.cc , surfacescore.cc , sequence_recovery.cc , mp_seqrecov.cc , remodel.cc
• use_jobname : InterfaceAnalyzer.cc
• use_regular_sasa_calc : BuriedUnsatPolarsFinder2.cc
• use_resfile : InterfaceAnalyzer.cc
• use_varsoldist_sasa_calc : xtal_water_bunsat.cc , BuriedUnsatPolarsFinder2.cc , khXtal_water_bunsat.cc , sasa_buns.cc , wat_distances.cc
• Ux : dxdock_movie.cc
• Uy : dxdock_movie.cc
• Uz : dxdock_movie.cc