protocols::motifs::BuildPosition Class Reference

#include <BuildPosition.hh>

Inheritance diagram for protocols::motifs::BuildPosition:

Public Member Functions
	BuildPosition (core::Size const seqpos, utility::vector1< core::Size > const &target_positions)
	BuildPosition (core::Size const seqpos, utility::vector1< core::Size > const &target_positions, std::set< std::string > const &allowed_types)
	~BuildPosition () override
	BuildPosition (BuildPosition const &src)
BuildPositionOP	clone () const
void	keep_rotamer (core::conformation::Residue const &res)
void	keep_motif (Motif const &motif)
void	keep_motifhit (MotifHit const &motifhit)
void	clear_data ()
void	clear_rots ()
core::Size const &	seqpos () const
utility::vector1< core::Size > const &	target_positions () const
std::set< std::string > const &	allowed_types () const
core::pack::rotamer_set::Rotamers const &	best_rotamers () const
MotifCOPs const &	best_motifs () const
MotifHitCOPs const &	best_motifhits () const

Private Attributes
core::Size	seqpos_
utility::vector1< core::Size >	target_positions_
std::set< std::string >	allowed_types_
core::pack::rotamer_set::Rotamers	best_rotamers_
MotifCOPs	best_motifs_
MotifHitCOPs	best_motifhits_

Constructor & Destructor Documentation

BuildPosition() [1/3]

protocols::motifs::BuildPosition::BuildPosition	(	core::Size const	seqpos,
		utility::vector1< core::Size > const &	target_positions
	)

BuildPosition() [2/3]

protocols::motifs::BuildPosition::BuildPosition	(	core::Size const	seqpos,
		utility::vector1< core::Size > const &	target_positions,
		std::set< std::string > const &	allowed_types
	)

~BuildPosition()

protocols::motifs::BuildPosition::~BuildPosition ( )

overridedefault

BuildPosition() [3/3]

protocols::motifs::BuildPosition::BuildPosition

(

BuildPosition const &

src

)

Member Function Documentation

allowed_types()

std::set< std::string > const& protocols::motifs::BuildPosition::allowed_types ( ) const

inline

References allowed_types_.

best_motifhits()

MotifHitCOPs const& protocols::motifs::BuildPosition::best_motifhits ( ) const

inline

References best_motifhits_.

best_motifs()

MotifCOPs const& protocols::motifs::BuildPosition::best_motifs ( ) const

inline

References best_motifs_.

best_rotamers()

core::pack::rotamer_set::Rotamers const& protocols::motifs::BuildPosition::best_rotamers ( ) const

inline

References best_rotamers_.

clear_data()

void protocols::motifs::BuildPosition::clear_data

(

)

References best_motifs_, and best_rotamers_.

clear_rots()

void protocols::motifs::BuildPosition::clear_rots

(

)

References best_rotamers_.

clone()

BuildPositionOP protocols::motifs::BuildPosition::clone

(

)

const

keep_motif()

void protocols::motifs::BuildPosition::keep_motif

(

Motif const &

motif

)

References best_motifs_, and protocols::motifs::Motif::clone().

Referenced by protocols::motifs::load_build_position_data().

keep_motifhit()

void protocols::motifs::BuildPosition::keep_motifhit

(

MotifHit const &

motifhit

)

References best_motifhits_, and protocols::motifs::MotifHit::clone().

keep_rotamer()

void protocols::motifs::BuildPosition::keep_rotamer

(

core::conformation::Residue const &

res

)

References best_rotamers_, and core::conformation::Residue::clone().

Referenced by protocols::motifs::load_build_position_data().

seqpos()

core::Size const& protocols::motifs::BuildPosition::seqpos ( ) const

inline

References seqpos_.

Referenced by protocols::motifs::load_build_position_data().

target_positions()

utility::vector1< core::Size > const& protocols::motifs::BuildPosition::target_positions ( ) const

inline

References target_positions_.

Member Data Documentation

allowed_types_

std::set< std::string > protocols::motifs::BuildPosition::allowed_types_

private

Referenced by allowed_types().

best_motifhits_

MotifHitCOPs protocols::motifs::BuildPosition::best_motifhits_

private

Referenced by best_motifhits(), and keep_motifhit().

best_motifs_

MotifCOPs protocols::motifs::BuildPosition::best_motifs_

private

Referenced by best_motifs(), clear_data(), and keep_motif().

best_rotamers_

core::pack::rotamer_set::Rotamers protocols::motifs::BuildPosition::best_rotamers_

private

Referenced by best_rotamers(), clear_data(), clear_rots(), and keep_rotamer().

seqpos_

core::Size protocols::motifs::BuildPosition::seqpos_

private

Referenced by seqpos().

target_positions_

utility::vector1< core::Size > protocols::motifs::BuildPosition::target_positions_

private

Referenced by target_positions().

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The documentation for this class was generated from the following files:

• src/protocols/motifs/BuildPosition.hh
• src/protocols/motifs/BuildPosition.cc