| acknowledge_neighbors_state_zeroed(Size neighbors_seqpos) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| acknowledge_substitution() | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| add_edge(BackgroundToFirstClassEdge< V, E, G > *edge_ptr) | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| adjacent_first_class_node_indices_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| adjacent_nodes_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| alt_atom_hbonds_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| alt_hbonds_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| alternate_hbs() | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| alternate_hbs_for_atom(Size atom_index) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| alternate_hbs_for_atoms() | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| BackgroundEdgeList typedef | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| BackgroundEdgeListIter typedef | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| BackgroundEdgeVector typedef | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| BackgroundEdgeVectorIter typedef | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| BackgroundNode(AdditionalBackgroundNodesInteractionGraph< V, E, G > *owner, int node_index) | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| BackgroundNode() | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| BackgroundNode(BackgroundNode< V, E, G > const &) | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| compute_alt_weights_for_hbonds() | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| count_dynamic_memory() const override | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | virtual |
| count_static_memory() const override | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | virtual |
| curr_atom_hbonds_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| curr_hbonds_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| current_hbs() | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| drop_edge(BackgroundEdgeListIter edge) | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| edge_list_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| edge_vector_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| edge_vector_up_to_date_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| find_edge(int fc_node_index) | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| FirstClassNodeVector typedef | core::pack::interaction_graph::BackgroundNode< V, E, G > | |
| get_adjacent_first_class_node(int index) const | core::pack::interaction_graph::BackgroundNode< V, E, G > | inlineprotected |
| get_edge_vector_up_to_date() const | core::pack::interaction_graph::BackgroundNode< V, E, G > | inlineprotected |
| get_incident_edge(int index) const | core::pack::interaction_graph::BackgroundNode< V, E, G > | inlineprotected |
| get_index_of_adjacent_first_class_node(int index) const | core::pack::interaction_graph::BackgroundNode< V, E, G > | inlineprotected |
| get_node_index() const | core::pack::interaction_graph::BackgroundNode< V, E, G > | inlineprotected |
| get_npd_hbond_bg_edge(int index) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | inlineprotected |
| get_npd_hbond_owner() const | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | inlineprotected |
| get_num_incident_edges() const | core::pack::interaction_graph::BackgroundNode< V, E, G > | inlineprotected |
| get_owner() const | core::pack::interaction_graph::BackgroundNode< V, E, G > | inlineprotected |
| get_rotamer() const | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| get_rotamer_op() const | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| get_upper_npd_hbond_energy_totals() const | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| node_index_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| NPDHBondBackgroundNode(AdditionalBackgroundNodesInteractionGraph< V, E, G > *owner, int node_index) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| NPDHBondBackgroundNode() | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| NPDHBondBackgroundNode(NPDHBondBackgroundNode< V, E, G > const &) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| num_incident_edges_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| operator=(NPDHBondBackgroundNode< V, E, G > const &) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| owner_ | core::pack::interaction_graph::BackgroundNode< V, E, G > | private |
| parent typedef | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| prepare_for_neighbors_substitution(Size nbrs_seqpos) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| prepare_for_simulated_annealing() override | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | virtual |
| prepared_for_simA_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| print() const override | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | virtual |
| rotamer_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| seqpos() const | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| seqpos_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| set_rotamer(conformation::ResidueOP const &rotamer) | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
| tmp_energies_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| tmp_weights_ | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | private |
| update_edge_vector() | core::pack::interaction_graph::BackgroundNode< V, E, G > | protected |
| ~BackgroundNode() | core::pack::interaction_graph::BackgroundNode< V, E, G > | virtual |
| ~NPDHBondBackgroundNode() override | core::pack::interaction_graph::NPDHBondBackgroundNode< V, E, G > | |
