core::scoring::rna::RNA_Motifs Class Reference

#include <RNA_Motif.hh>

Inheritance diagram for core::scoring::rna::RNA_Motifs:

Public Member Functions
	RNA_Motifs ()
	~RNA_Motifs () override
void	push_back (RNA_Motif const &rna_motif)
utility::vector1< RNA_Motif > const &	get_motifs () const
utility::vector1< RNA_Motif >::const_iterator	begin () const
utility::vector1< RNA_Motif >::const_iterator	end () const
utility::vector1< RNA_Motif > const &	get_motifs (RNA_MotifType const &type) const

Private Attributes
utility::vector1< RNA_Motif >	rna_motifs_
std::map< RNA_MotifType, utility::vector1< RNA_Motif > >	rna_motif_map_

Friends
std::ostream &	operator<< (std::ostream &out, RNA_Motifs const &s)

Constructor & Destructor Documentation

RNA_Motifs()

core::scoring::rna::RNA_Motifs::RNA_Motifs ( )

inline

~RNA_Motifs()

core::scoring::rna::RNA_Motifs::~RNA_Motifs ( )

inlineoverride

Member Function Documentation

begin()

utility::vector1< RNA_Motif >::const_iterator core::scoring::rna::RNA_Motifs::begin ( ) const

inline

References rna_motifs_.

end()

utility::vector1< RNA_Motif >::const_iterator core::scoring::rna::RNA_Motifs::end ( ) const

inline

References rna_motifs_.

get_motifs() [1/2]

utility::vector1< RNA_Motif > const& core::scoring::rna::RNA_Motifs::get_motifs ( ) const

inline

References rna_motifs_.

Referenced by core::scoring::rna::get_rna_motif_score(), core::scoring::rna::get_rna_motifs(), core::scoring::rna::output_rna_motifs_detailed(), and core::pose::rna::output_stems().

get_motifs() [2/2]

utility::vector1< RNA_Motif > const& core::scoring::rna::RNA_Motifs::get_motifs ( RNA_MotifType const &  type ) const

inline

References rna_motif_map_.

push_back()

void core::scoring::rna::RNA_Motifs::push_back ( RNA_Motif const &  rna_motif )

inline

References core::scoring::rna_motif, rna_motif_map_, and rna_motifs_.

Referenced by core::scoring::rna::get_rna_motifs().

Friends And Related Function Documentation

operator<<

std::ostream& operator<< ( std::ostream &  out, RNA_Motifs const &  s  )

friend

Member Data Documentation

rna_motif_map_

std::map< RNA_MotifType, utility::vector1< RNA_Motif> > core::scoring::rna::RNA_Motifs::rna_motif_map_

mutableprivate

Referenced by get_motifs(), and push_back().

rna_motifs_

utility::vector1< RNA_Motif > core::scoring::rna::RNA_Motifs::rna_motifs_

private

Referenced by begin(), end(), get_motifs(), and push_back().

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The documentation for this class was generated from the following file:

• src/core/scoring/rna/RNA_Motif.hh