| add_segment_envelopes_from_string(std::string motifs) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| add_to_segment_envelopes(utility::vector1< SegmentEnvelopeOP > new_envelope) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| all_poseOPs_ | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | private |
| clear_all_vectors() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| clear_segment_envelopes() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| clear_terminal_vectors() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| clone() const | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| convert_pose_into_segment_vector(core::pose::PoseOP current_pose) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| create_segment_file(std::string) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| cterm_secstructs_ | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | private |
| get_all_poseOPs() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| get_random_pose(std::string, std::string) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| get_total_size() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| get_vector(std::string nterm_secstructs, std::string cterm_secstructs) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| nterm_secstructs_ | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | private |
| parse_motif_file(std::string motif_file) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| populate_all_OP_vector() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| populate_from_pdb_list(std::string pdb_list) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| populate_from_pdb_list(std::string motif_file, std::string pdb_list) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| populate_from_segment_file(std::string, bool clear=false) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| populate_from_segment_file_and_get_random_vector_set(utility::vector1< std::string > const &paths, std::string const &allowed_n_ter_ss, std::string const &allowed_c_ter_ss, core::Size max_vector_size=5000) const | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| populate_from_segment_file_and_get_random_vector_set(std::string const &path, std::string const &allowed_n_ter_ss, std::string const &allowed_c_ter_ss, core::Size max_vector_size=5000) const | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| poseOP_map_ | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | private |
| purge_missing_density() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| segment_envelopes_ | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | private |
| set_segment_envelopes(utility::vector1< utility::vector1< SegmentEnvelopeOP >>) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| simultaneously_populate_and_write_segment_file(std::string const &motif_filename, std::string const &pdb_list, std::string const &file_path, bool store_reference_pdbs, bool use_pdbs_only, utility::vector1< protocols::filters::FilterOP > const &filters, utility::vector1< core::simple_metrics::SimpleMetricOP > const &metrics, bool output_elements=false) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| simultaneously_populate_and_write_segment_file_pdb(core::pose::Pose const &pose, std::string const &motif_filename, std::string const &file_path, bool store_reference_pdbs, bool use_pdbs_only, utility::vector1< protocols::filters::FilterOP > const &filters, utility::vector1< core::simple_metrics::SimpleMetricOP > const &metrics, bool output_elements=false) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| simultaneously_populate_and_write_segment_file_pdb_using_stored_motifs(core::pose::Pose const &pose, std::string const &file_path, bool store_reference_pdbs, bool use_pdbs_only, utility::vector1< protocols::filters::FilterOP > const &filters, utility::vector1< core::simple_metrics::SimpleMetricOP > const &metrics, bool output_elements) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| store_pose(PoseSegmentOP, PoseSegmentOP) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| store_pose(PoseWithTerminalSegmentsOfKnownDSSPOP) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| TerminalDSSPSortedPoseVector() | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| TerminalDSSPSortedPoseVector(TerminalDSSPSortedPoseVector const &src) | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
| ~TerminalDSSPSortedPoseVector() override | protocols::pose_sewing::data_storage::TerminalDSSPSortedPoseVector | |
