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protocols::rbsegment_relax::ConfChangeMover Member List

This is the complete list of members for protocols::rbsegment_relax::ConfChangeMover, including all inherited members.

add_dihedral_csts(core::pose::Pose &pose, core::pose::Pose const &original_pose)protocols::rbsegment_relax::ConfChangeMover
add_dihedral_csts_to_rb(core::pose::Pose &pose, core::pose::Pose const &original_pose)protocols::rbsegment_relax::ConfChangeMover
addend_protocols::rbsegment_relax::ConfChangeMoverprivate
addstart_protocols::rbsegment_relax::ConfChangeMoverprivate
align_templates_to_pose_protocols::hybridization::CartesianHybridizeprivate
apply(core::pose::Pose &pose) overrideprotocols::rbsegment_relax::ConfChangeMovervirtual
apply_frag(core::pose::Pose &pose, core::pose::Pose &templ, protocols::loops::Loop &frag, bool superpose=true)protocols::hybridization::CartesianHybridizeprotected
apply_frame(core::pose::Pose &pose, core::fragment::Frame &frame)protocols::hybridization::CartesianHybridizeprotected
CartesianHybridize()protocols::hybridization::CartesianHybridize
CartesianHybridize(utility::vector1< core::pose::PoseOP > const &templates_in, utility::vector1< core::Real > const &template_wts_in, utility::vector1< protocols::loops::Loops > const &template_chunks_in, utility::vector1< protocols::loops::Loops > const &template_contigs_in, core::fragment::FragSetOP fragments9_in)protocols::hybridization::CartesianHybridize
cartfrag_overlap_protocols::hybridization::CartesianHybridizeprivate
cenrot_protocols::hybridization::CartesianHybridizeprivate
cenrot_repack_scorefxn_protocols::hybridization::CartesianHybridizeprivate
check_gaps(core::pose::Pose &pose)protocols::rbsegment_relax::ConfChangeMover
check_or_create_fragments(core::pose::Pose &pose)protocols::rbsegment_relax::ConfChangeMover
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::rbsegment_relax::ConfChangeMovervirtual
ConfChangeMover()protocols::rbsegment_relax::ConfChangeMover
create()protocols::moves::Movervirtual
current_job_protocols::moves::Moverprivate
current_tag_protocols::moves::Moverprivate
dihed2_res_protocols::rbsegment_relax::ConfChangeMoverprivate
fragments9_protocols::hybridization::CartesianHybridizeprivate
fragprob_protocols::hybridization::CartesianHybridizeprivate
frags3_protocols::rbsegment_relax::ConfChangeMoverprivate
frags9_protocols::rbsegment_relax::ConfChangeMoverprivate
frames_protocols::rbsegment_relax::ConfChangeMoverprivate
fresh_instance() const overrideprotocols::hybridization::CartesianHybridizevirtual
get_additional_output() overrideprotocols::rbsegment_relax::ConfChangeMovervirtual
get_current_job() constprotocols::moves::Mover
get_current_tag() constprotocols::moves::Moverinline
get_input_pose() constprotocols::moves::Mover
get_last_move_status() constprotocols::moves::Mover
get_name() const overrideprotocols::rbsegment_relax::ConfChangeMoverprivatevirtual
get_native_pose() constprotocols::moves::Mover
get_residues_in_rbsegment(rbsegment_relax::RBSegment const &rbseg) constprotocols::rbsegment_relax::ConfChangeMover
get_self_ptr() constprotocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() constprotocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() constprotocols::moves::Moverinline
helixmover_protocols::rbsegment_relax::ConfChangeMoverprivate
increase_cycles_protocols::hybridization::CartesianHybridizeprivate
info()protocols::moves::Moverinlinevirtual
info() constprotocols::moves::Moverinlinevirtual
info_protocols::moves::Moverprivate
init()protocols::hybridization::CartesianHybridize
input_pose_protocols::moves::Moverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
last_status_protocols::moves::Moverprivate
library_protocols::hybridization::CartesianHybridizeprivate
linmin_only_protocols::hybridization::CartesianHybridizeprivate
loops_protocols::rbsegment_relax::ConfChangeMoverprivate
lowres_scorefxn_protocols::hybridization::CartesianHybridizeprivate
max_contig_insertion_protocols::hybridization::CartesianHybridizeprivate
min_scorefxn_protocols::hybridization::CartesianHybridizeprivate
minimizer_protocols::rbsegment_relax::ConfChangeMoverprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::rbsegment_relax::ConfChangeMoverstatic
multi_rb(core::pose::Pose &pose, bool const &multiple_sses)protocols::rbsegment_relax::ConfChangeMover
name()protocols::moves::Moverinlinestatic
native_pose_protocols::moves::Moverprivate
ncycles_protocols::hybridization::CartesianHybridizeprivate
newend_protocols::rbsegment_relax::ConfChangeMoverprivate
newstart_protocols::rbsegment_relax::ConfChangeMoverprivate
no_global_frame_protocols::hybridization::CartesianHybridizeprivate
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) overrideprotocols::rbsegment_relax::ConfChangeMoverprivatevirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) constprotocols::moves::Movervirtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::rbsegment_relax::ConfChangeMoverstatic
randfragprob_protocols::hybridization::CartesianHybridizeprivate
rb_file_protocols::rbsegment_relax::ConfChangeMoverprivate
rbmover_protocols::rbsegment_relax::ConfChangeMoverprivate
rbsegs_protocols::rbsegment_relax::ConfChangeMoverprivate
rbsegs_2_protocols::rbsegment_relax::ConfChangeMoverprivate
recursive_residues_from_rbsegs(rbsegment_relax::RBSegment const &rbseg, std::set< core::Size > &residues) constprotocols::rbsegment_relax::ConfChangeMover
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() constprotocols::moves::Movervirtual
reinitialize_for_new_input() constprotocols::moves::Movervirtual
res_adj_protocols::rbsegment_relax::ConfChangeMoverprivate
reset_status()protocols::moves::Mover
residue_sample_abinitio_protocols::hybridization::CartesianHybridizeprivate
residue_sample_template_protocols::hybridization::CartesianHybridizeprivate
rot_protocols::rbsegment_relax::ConfChangeMoverprivate
s1_frag_move_protocols::rbsegment_relax::ConfChangeMoverprivate
s1_rb_multi_protocols::rbsegment_relax::ConfChangeMoverprivate
s1_rb_single_protocols::rbsegment_relax::ConfChangeMoverprivate
s1_res_protocols::rbsegment_relax::ConfChangeMoverprivate
s1_rigid_res_protocols::rbsegment_relax::ConfChangeMoverprivate
s1_twist_protocols::rbsegment_relax::ConfChangeMoverprivate
s2_frame_random_protocols::rbsegment_relax::ConfChangeMoverprivate
s2_frame_select_protocols::rbsegment_relax::ConfChangeMoverprivate
s2_homolog_move_protocols::rbsegment_relax::ConfChangeMoverprivate
s2_res_protocols::rbsegment_relax::ConfChangeMoverprivate
seg_protocols::rbsegment_relax::ConfChangeMoverprivate
seqfrags_only_protocols::hybridization::CartesianHybridizeprivate
set_cartfrag_overlap(core::Size cartfrag_overlap_in)protocols::hybridization::CartesianHybridizeinline
set_cenrot(bool cenrot_in)protocols::hybridization::CartesianHybridizeinline
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_fragment_probs(core::Real prob, core::Real randprob)protocols::hybridization::CartesianHybridizeinline
set_increase_cycles(core::Real increase_cycles_in)protocols::hybridization::CartesianHybridizeinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_linmin_only(bool linmin_only_in)protocols::hybridization::CartesianHybridizeinline
set_max_insertion(int max_in)protocols::hybridization::CartesianHybridizeinline
set_min_scorefunction(core::scoring::ScoreFunctionOP scorefxn_in)protocols::hybridization::CartesianHybridize
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_no_global_frame(bool no_global_frame_in)protocols::hybridization::CartesianHybridizeinline
set_pack_scorefunction(core::scoring::ScoreFunctionOP scorefxn_in)protocols::hybridization::CartesianHybridize
set_per_residue_controls(utility::vector1< bool > const &residue_sample_template_in, utility::vector1< bool > const &residue_sample_abinitio_in)protocols::hybridization::CartesianHybridizeinline
set_scorefunction(core::scoring::ScoreFunctionOP scorefxn_in)protocols::hybridization::CartesianHybridize
set_seqfrags_only(bool seqfrags_only_in)protocols::hybridization::CartesianHybridizeinline
set_skip_long_min(bool skip_long_min_in)protocols::hybridization::CartesianHybridizeinline
set_temperature(core::Real temp_in)protocols::hybridization::CartesianHybridizeinline
set_type(std::string const &setting)protocols::moves::Moverinline
show(std::ostream &output=std::cout) constprotocols::moves::Movervirtual
skip_long_min_protocols::hybridization::CartesianHybridizeprivate
sse_contact_strength(core::pose::Pose &pose) constprotocols::rbsegment_relax::ConfChangeMover
stage1(core::pose::Pose &pose)protocols::rbsegment_relax::ConfChangeMover
stage1_frag_freq_protocols::rbsegment_relax::ConfChangeMoverprivate
stage1_minimization_protocols::rbsegment_relax::ConfChangeMoverprivate
stage1_move_restore_protocols::rbsegment_relax::ConfChangeMoverprivate
stage1_moves_protocols::rbsegment_relax::ConfChangeMoverprivate
stage1_multi_freq_protocols::rbsegment_relax::ConfChangeMoverprivate
stage1_pose_setup(core::pose::Pose &pose)protocols::rbsegment_relax::ConfChangeMover
stage1_scorefxn_protocols::rbsegment_relax::ConfChangeMoverprivate
stage1_temp_protocols::rbsegment_relax::ConfChangeMoverprivate
stage1_twist_freq_protocols::rbsegment_relax::ConfChangeMoverprivate
stage2(core::pose::Pose &pose, core::pose::Pose const &original_pose)protocols::rbsegment_relax::ConfChangeMover
stage2_models_protocols::rbsegment_relax::ConfChangeMoverprivate
stage2_moves_protocols::rbsegment_relax::ConfChangeMoverprivate
stage2_scorefxn_protocols::rbsegment_relax::ConfChangeMoverprivate
stage2_segment_freq_protocols::rbsegment_relax::ConfChangeMoverprivate
stage2_targgaps_freq_protocols::rbsegment_relax::ConfChangeMoverprivate
stage2_temp_protocols::rbsegment_relax::ConfChangeMoverprivate
store_poseOPs_protocols::rbsegment_relax::ConfChangeMoverprivate
stored_rebsegs_protocols::rbsegment_relax::ConfChangeMoverprivate
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
temperature_protocols::hybridization::CartesianHybridizeprivate
template_protocols::rbsegment_relax::ConfChangeMoverprivate
template_contigs_protocols::hybridization::CartesianHybridizeprivate
template_wts_protocols::hybridization::CartesianHybridizeprivate
templates_protocols::hybridization::CartesianHybridizeprivate
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
transl_protocols::rbsegment_relax::ConfChangeMoverprivate
type(const std::string &type_in)protocols::moves::Moverinline
type() constprotocols::moves::Moverinline
type_protocols::moves::Moverprivate
~ConfChangeMover() override=defaultprotocols::rbsegment_relax::ConfChangeMover
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