protocols::pdbinfo_manipulations::AlignPDBInfoToSequences Member List

This is the complete list of members for protocols::pdbinfo_manipulations::AlignPDBInfoToSequences, including all inherited members.

apply(core::pose::Pose &pose) override	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	virtual
apply_multi_sequence(core::pose::Pose &pose)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	private
apply_single_sequence(core::pose::Pose &pose)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	virtual
create()	protocols::moves::Mover	virtual
current_job_	protocols::moves::Mover	private
current_tag_	protocols::moves::Mover	private
fresh_instance() const override	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_mode() const	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
get_mode_as_string() const	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
get_name() const override	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_sequence_alignment_cut_max() const	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
get_target_sequences() const	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
get_target_sequences()	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
get_throw_on_fail() const	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
info_	protocols::moves::Mover	private
input_pose_	protocols::moves::Mover	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
last_status_	protocols::moves::Mover	private
load_json_file(std::string const &json_fn)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
mode_	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	static
name()	protocols::moves::Mover	inlinestatic
native_pose_	protocols::moves::Mover	private
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) override	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	virtual
parse_target_tag(utility::tag::TagCOP const &tag) const	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	static
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
sequence_alignment_cut_max_	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_mode(AlignPDBInfoToSequencesMode const &mode)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
set_mode_from_string(std::string const &mode)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_sequence_alignment_cut_max(core::Size const sequence_alignment_cut_max)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
set_target_sequences(utility::vector1< SequenceSpecification > const &target_sequences)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
set_throw_on_fail(bool const throw_on_fail)	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	inline
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const override	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
target_sequences_	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	private
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
throw_on_fail_	protocols::pdbinfo_manipulations::AlignPDBInfoToSequences	private
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
type_	protocols::moves::Mover	private