core::scoring::rna::RNP_LowResStackData Class Reference

#include <RNP_LowResStackData.hh>

Inheritance diagram for core::scoring::rna::RNP_LowResStackData:

Public Member Functions
	RNP_LowResStackData ()
	c-tor More...
void	initialize_rnp_stack_xy ()
void	evaluate_rnp_stack_xy_score (conformation::Residue const &rsd1, conformation::Residue const &rsd2, Real const &x, Real const &y, Real &rnp_stack_score) const

Private Attributes
Size const	max_aa_ = 20
Size const	max_base_ = 4
Size const	num_xbins_ = 10
Size const	num_ybins_ = 10
ObjexxFCL::FArray4D< Real >	rnp_stack_xy_

Constructor & Destructor Documentation

RNP_LowResStackData()

core::scoring::rna::RNP_LowResStackData::RNP_LowResStackData

(

)

c-tor

Member Function Documentation

evaluate_rnp_stack_xy_score()

void core::scoring::rna::RNP_LowResStackData::evaluate_rnp_stack_xy_score	(	conformation::Residue const &	rsd1,
		conformation::Residue const &	rsd2,
		Real const &	x,
		Real const &	y,
		Real &	rnp_stack_score
	)		const

References core::conformation::Residue::aa(), protocols::cluster::calibur::aa, core::chemical::rna::convert_acgu_to_1234(), core::conformation::Residue::has_variant_type(), core::conformation::Residue::is_protein(), core::conformation::Residue::is_RNA(), core::conformation::Residue::name1(), and core::chemical::REPLONLY.

Referenced by core::energy_methods::RNP_LowResStackEnergy::residue_pair_energy().

initialize_rnp_stack_xy()

void core::scoring::rna::RNP_LowResStackData::initialize_rnp_stack_xy

(

)

References protocols::cluster::calibur::aa, core::chemical::rna::convert_acgu_to_1234(), protocols::abinitio::filename(), and core::chemical::rna::TR().

Member Data Documentation

max_aa_

Size const core::scoring::rna::RNP_LowResStackData::max_aa_ = 20

private

max_base_

Size const core::scoring::rna::RNP_LowResStackData::max_base_ = 4

private

num_xbins_

Size const core::scoring::rna::RNP_LowResStackData::num_xbins_ = 10

private

num_ybins_

Size const core::scoring::rna::RNP_LowResStackData::num_ybins_ = 10

private

rnp_stack_xy_

ObjexxFCL::FArray4D< Real > core::scoring::rna::RNP_LowResStackData::rnp_stack_xy_

private

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The documentation for this class was generated from the following files:

• src/core/scoring/rna/RNP_LowResStackData.hh
• src/core/scoring/rna/RNP_LowResStackData.cc