protocols::pose_length_moves::ConnectChainsMover Member List

This is the complete list of members for protocols::pose_length_moves::ConnectChainsMover, including all inherited members.

allowed_loop_abegos_	protocols::pose_length_moves::ConnectChainsMover	private
apply(Pose &pose) override	protocols::pose_length_moves::ConnectChainsMover	virtual
assemble_missing_chain(std::map< std::string, Chain > &connected_chains, std::string chain_assembled, std::string chain_remainder)	protocols::pose_length_moves::ConnectChainsMover
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::pose_length_moves::ConnectChainsMover	inlinevirtual
ConnectChainsMover()	protocols::pose_length_moves::ConnectChainsMover
create()	protocols::moves::Mover	virtual
current_job_	protocols::moves::Mover	private
current_tag_	protocols::moves::Mover	private
fragment_store_compression_	protocols::pose_length_moves::ConnectChainsMover	private
fragment_store_format_	protocols::pose_length_moves::ConnectChainsMover	private
fragment_store_path_	protocols::pose_length_moves::ConnectChainsMover	private
fresh_instance() const	protocols::moves::Mover	virtual
generate_best_final_pose(core::pose::Pose &pose, utility::vector1< utility::vector1< std::string > > chains_in_poses, std::map< std::string, Chain > connected_chains)	protocols::pose_length_moves::ConnectChainsMover
generate_connected_chains(core::pose::Pose const pose, utility::vector1< std::string > individual_chains)	protocols::pose_length_moves::ConnectChainsMover
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::pose_length_moves::ConnectChainsMover	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
info_	protocols::moves::Mover	private
input_pose_	protocols::moves::Mover	private
label_loop_	protocols::pose_length_moves::ConnectChainsMover	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
last_status_	protocols::moves::Mover	private
loopLengthRangeHigh_	protocols::pose_length_moves::ConnectChainsMover	private
loopLengthRangeLow_	protocols::pose_length_moves::ConnectChainsMover	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::pose_length_moves::ConnectChainsMover	static
name()	protocols::moves::Mover	inlinestatic
native_pose_	protocols::moves::Mover	private
numb_stubs_to_consider_	protocols::pose_length_moves::ConnectChainsMover	private
output_chains_	protocols::pose_length_moves::ConnectChainsMover	private
parse_input(utility::vector1< std::string > &individual_chains, utility::vector1< utility::vector1< std::string > > &chains_in_poses)	protocols::pose_length_moves::ConnectChainsMover
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &datamap) override	protocols::pose_length_moves::ConnectChainsMover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::pose_length_moves::ConnectChainsMover	static
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reletter_chains(Pose &pose)	protocols::pose_length_moves::ConnectChainsMover
reletter_chains_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStartHigh_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStartHigh_sheet_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStartLow_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStartLow_sheet_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStopHigh_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStopHigh_sheet_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStopLow_	protocols::pose_length_moves::ConnectChainsMover	private
resAdjustmentStopLow_sheet_	protocols::pose_length_moves::ConnectChainsMover	private
reset_status()	protocols::moves::Mover
rmsThreshold_	protocols::pose_length_moves::ConnectChainsMover	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
type_	protocols::moves::Mover	private