protocols::electron_density::DockFragmentsIntoDensityMover Member List

This is the complete list of members for protocols::electron_density::DockFragmentsIntoDensityMover, including all inherited members.

apply(core::pose::Pose &pose) override	protocols::electron_density::DockFragmentsIntoDensityMover	virtual
apply_multi(utility::vector1< core::pose::PoseOP > &poses)	protocols::electron_density::DockFragmentsIntoDensityMover
B_	protocols::electron_density::DockFragmentsIntoDensityMover	private
center_on_middle_ca_	protocols::electron_density::DockFragmentsIntoDensityMover	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
cluster_oversample_	protocols::electron_density::DockFragmentsIntoDensityMover	private
cluster_radius_	protocols::electron_density::DockFragmentsIntoDensityMover	private
convolute_single_residue_	protocols::electron_density::DockFragmentsIntoDensityMover	private
create()	protocols::moves::Mover	virtual
current_job_	protocols::moves::Mover	private
current_tag_	protocols::moves::Mover	private
delR_	protocols::electron_density::DockFragmentsIntoDensityMover	private
dens_wt_	protocols::electron_density::DockFragmentsIntoDensityMover	private
do_refine_	protocols::electron_density::DockFragmentsIntoDensityMover	private
do_refinement(utility::vector1< core::pose::PoseOP > const &poses, RBfitResultDB &results_in, RefinementResultDB &results_out)	protocols::electron_density::DockFragmentsIntoDensityMover
DockFragmentsIntoDensityMover()	protocols::electron_density::DockFragmentsIntoDensityMover	inline
fragDens_	protocols::electron_density::DockFragmentsIntoDensityMover	private
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_multi_native() const &	protocols::electron_density::DockFragmentsIntoDensityMover	inline
get_multi_native_com() const	protocols::electron_density::DockFragmentsIntoDensityMover	inline
get_multi_native_mca() const	protocols::electron_density::DockFragmentsIntoDensityMover	inline
get_name() const override	protocols::electron_density::DockFragmentsIntoDensityMover	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
gridStep_	protocols::electron_density::DockFragmentsIntoDensityMover	private
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
info_	protocols::moves::Mover	private
input_pose_	protocols::moves::Mover	private
laplacian_offset_	protocols::electron_density::DockFragmentsIntoDensityMover	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
last_status_	protocols::moves::Mover	private
map_from_spectrum(utility::vector1< core::Real > const &pose_1dspec, ObjexxFCL::FArray3D< core::Real > &rot)	protocols::electron_density::DockFragmentsIntoDensityMover
max_rot_per_trans_	protocols::electron_density::DockFragmentsIntoDensityMover	private
min_backbone_	protocols::electron_density::DockFragmentsIntoDensityMover	private
mindist_	protocols::electron_density::DockFragmentsIntoDensityMover	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
native_	protocols::electron_density::DockFragmentsIntoDensityMover	private
native_com_	protocols::electron_density::DockFragmentsIntoDensityMover	private
native_middle_ca_	protocols::electron_density::DockFragmentsIntoDensityMover	private
native_pose_	protocols::moves::Mover	private
ncyc_	protocols::electron_density::DockFragmentsIntoDensityMover	private
nRsteps_	protocols::electron_density::DockFragmentsIntoDensityMover	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
passthrough_	protocols::electron_density::DockFragmentsIntoDensityMover	private
point_radius_	protocols::electron_density::DockFragmentsIntoDensityMover	private
points_defined_	protocols::electron_density::DockFragmentsIntoDensityMover	private
points_to_search_	protocols::electron_density::DockFragmentsIntoDensityMover	private
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
predefine_search(utility::vector1< numeric::xyzVector< core::Real > > &pts_in)	protocols::electron_density::DockFragmentsIntoDensityMover
print_best_rms(core::pose::Pose const &pose, RBfitResultDB const &results)	protocols::electron_density::DockFragmentsIntoDensityMover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
setB(core::Real B)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setCenterOnMiddleCA(bool val)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setClusterOversamp(core::Size cluster_oversample)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setClusterRadius(core::Real cluster_radius)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setConvoluteSingleR(bool convolute_single_residue)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setDelR(core::Real delR)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setDoRefine(bool do_refine)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setFragDens(core::Real fragDens)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setGridStep(core::Size gridStep)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setLaplacianOffset(core::Real laplacian_offset)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setMaxRotPerTrans(core::Size max_rot_per_trans)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setMinBackbone(bool min_backbone)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setMinDist(core::Real mindist)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setNative(core::pose::PoseOP native)	protocols::electron_density::DockFragmentsIntoDensityMover
setNCyc(core::Size ncyc)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setNRsteps(core::Real nRsteps)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setOutputSilent(std::string silent_out)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setPassThrough(bool passthrough)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setPointRadius(core::Real point_radius)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setSymminfo(DensitySymmInfo const &symminfo)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setTag(std::string tag)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
setTopN(core::Real topNtrans, core::Real topNfilter, core::Real topNfinal)	protocols::electron_density::DockFragmentsIntoDensityMover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
silent_	protocols::electron_density::DockFragmentsIntoDensityMover	private
Strings typedef	protocols::moves::Mover
symminfo_	protocols::electron_density::DockFragmentsIntoDensityMover	private
tag_	protocols::electron_density::DockFragmentsIntoDensityMover	private
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
topNfilter_	protocols::electron_density::DockFragmentsIntoDensityMover	private
topNfinal_	protocols::electron_density::DockFragmentsIntoDensityMover	private
topNtrans_	protocols::electron_density::DockFragmentsIntoDensityMover	private
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
type_	protocols::moves::Mover	private