| all_mutants_ | protocols::pmut_scan::PointMutScanDriver | private |
| AlterSpecDisruptionDriver(utility::vector1< std::string > &pdb_file_names, bool double_mutant_scan, std::string list_file, bool output_mutant_structures) | protocols::pmut_scan::AlterSpecDisruptionDriver | |
| barrier() | protocols::pmut_scan::PointMutScanDriver | private |
| calculate_neighbor_table(core::pose::Pose &pose, utility::vector1< utility::vector1< bool > > &neighbors) | protocols::pmut_scan::PointMutScanDriver | |
| DDG_cutoff_ | protocols::pmut_scan::PointMutScanDriver | private |
| divide_up_mutations() | protocols::pmut_scan::PointMutScanDriver | private |
| double_mutant_scan_ | protocols::pmut_scan::PointMutScanDriver | private |
| fill_mutations_list() | protocols::pmut_scan::PointMutScanDriver | |
| get_scorefxn() const | protocols::pmut_scan::PointMutScanDriver | |
| go() | protocols::pmut_scan::PointMutScanDriver | |
| IAM_ | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| input_poses_ | protocols::pmut_scan::PointMutScanDriver | private |
| interface_set_ | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| make_mutant_structure(core::pose::Pose &mutant_pose, core::pose::Pose &native_pose, protocols::pmut_scan::MutationData const &md) | protocols::pmut_scan::PointMutScanDriver | private |
| make_mutants() | protocols::pmut_scan::PointMutScanDriver | private |
| make_specific_mutant(utility::vector1< core::pose::Pose > &mutant_poses, utility::vector1< core::pose::Pose > &native_poses, protocols::pmut_scan::Mutant &m, std::string mutation_string="", std::string mutation_string_PDB_numbering="") | protocols::pmut_scan::PointMutScanDriver | |
| MPI_nprocs_ | protocols::pmut_scan::PointMutScanDriver | private |
| MPI_rank_ | protocols::pmut_scan::PointMutScanDriver | private |
| mutants_begin() const | protocols::pmut_scan::PointMutScanDriver | |
| mutants_end() const | protocols::pmut_scan::PointMutScanDriver | |
| mutants_list_ | protocols::pmut_scan::PointMutScanDriver | private |
| mutants_list_file_ | protocols::pmut_scan::PointMutScanDriver | private |
| n_mutants() const | protocols::pmut_scan::PointMutScanDriver | |
| node_name(core::Size rank) | protocols::pmut_scan::PointMutScanDriver | private |
| output_mutant_structures_ | protocols::pmut_scan::PointMutScanDriver | private |
| pdb_file_names_ | protocols::pmut_scan::PointMutScanDriver | private |
| PointMutScanDriver(utility::vector1< std::string > &pdb_file_names, bool double_mutant_scan, std::string const &list_file, bool output_mutant_structures) | protocols::pmut_scan::PointMutScanDriver | |
| read_in_structures() | protocols::pmut_scan::PointMutScanDriver | |
| read_mutants_list_file(std::string &list_file) | protocols::pmut_scan::PointMutScanDriver | private |
| reject_mutant(Mutant const &mutant, core::pose::Pose const &pose) override | protocols::pmut_scan::AlterSpecDisruptionDriver | virtual |
| reject_on_chains(Mutant const &mutant) | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| reject_on_interface(Mutant const &mutant, core::pose::Pose const &pose) | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| score(core::pose::Pose &pose) override | protocols::pmut_scan::AlterSpecDisruptionDriver | virtual |
| scorefxn_ | protocols::pmut_scan::PointMutScanDriver | private |
| set_ddG_cutoff(core::Real threshold) | protocols::pmut_scan::PointMutScanDriver | |
| ~AlterSpecDisruptionDriver() override | protocols::pmut_scan::AlterSpecDisruptionDriver | |
| ~PointMutScanDriver() | protocols::pmut_scan::PointMutScanDriver | virtual |
