core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT Class Reference

#include <ResLvlTaskOperations.hh>

Inheritance diagram for core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT:

Public Types
typedef ResLvlTaskOperation	parent
Public Types inherited from core::pack::task::operation::ResLvlTaskOperation
typedef utility::tag::TagCOP	TagCOP

Public Member Functions
	RestrictAbsentCanonicalAASExceptNativeRLT ()
	~RestrictAbsentCanonicalAASExceptNativeRLT () override
ResLvlTaskOperationOP	clone () const override
	Create another task operation of the type matching the most-derived version of the class. More...
void	apply (ResidueLevelTask &) const override
	Change a ResidueLevelTask in some way. The input pose is the one to which the input task will be later applied. More...
void	aas_to_keep (utility::vector1< bool > const &)
void	aas_to_keep (std::string const &)
void	parse_tag (TagCOP) override
	parser xml-like tags to set class data/parameters More...
Public Member Functions inherited from core::pack::task::operation::ResLvlTaskOperation
virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static std::string	keyname ()
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Private Attributes
utility::vector1< bool >	canonical_aas_to_keep_

Member Typedef Documentation

parent

typedef ResLvlTaskOperation core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::parent

Constructor & Destructor Documentation

RestrictAbsentCanonicalAASExceptNativeRLT()

core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::RestrictAbsentCanonicalAASExceptNativeRLT

(

)

~RestrictAbsentCanonicalAASExceptNativeRLT()

core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::~RestrictAbsentCanonicalAASExceptNativeRLT ( )

overridedefault

Member Function Documentation

aas_to_keep() [1/2]

void core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::aas_to_keep

(

std::string const &

aastring

)

References core::chemical::aa_from_oneletter_code(), canonical_aas_to_keep_, core::chemical::num_canonical_aas, and core::chemical::oneletter_code_specifies_aa().

aas_to_keep() [2/2]

void core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::aas_to_keep

(

utility::vector1< bool > const &

aa_flags

)

References canonical_aas_to_keep_, and core::chemical::num_canonical_aas.

Referenced by parse_tag().

apply()

void core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::apply ( ResidueLevelTask &  ) const

overridevirtual

Change a ResidueLevelTask in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::ResLvlTaskOperation.

References canonical_aas_to_keep_, and core::pack::task::ResidueLevelTask::restrict_nonnative_canonical_aas().

clone()

ResLvlTaskOperationOP core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::clone ( ) const

overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::ResLvlTaskOperation.

keyname()

std::string core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::keyname ( )

static

Referenced by core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLTCreator::keyname(), and provide_xml_schema().

parse_tag()

void core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::parse_tag ( TagCOP  )

overridevirtual

parser xml-like tags to set class data/parameters

Reimplemented from core::pack::task::operation::ResLvlTaskOperation.

References aas_to_keep().

provide_xml_schema()

void core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References keyname(), and core::pack::task::operation::res_lvl_task_op_schema_w_attributes().

Referenced by core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLTCreator::provide_xml_schema().

Member Data Documentation

canonical_aas_to_keep_

utility::vector1< bool > core::pack::task::operation::RestrictAbsentCanonicalAASExceptNativeRLT::canonical_aas_to_keep_

private

Referenced by aas_to_keep(), and apply().

---

The documentation for this class was generated from the following files:

• src/core/pack/task/operation/ResLvlTaskOperations.hh
• src/core/pack/task/operation/ResLvlTaskOperations.cc