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Rosetta
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Classes | |
| class | CurrentProbabilityMetric |
| A metric for calculating the probability delta between the current amino acid and the most likely from a PerResidueProbabilitiesMetric. More... | |
| class | CurrentProbabilityMetricCreator |
| class | HbondMetric |
| A metric to report the total h-bonds residues from a selection to all [OTHER] residues, or from a set of residues to another set of residues. If No selection is given, will report ALL vs ALL. More... | |
| class | LoadedProbabilitiesMetric |
| A class to load a probabilities weights file into a PerResidueProbabilitiesMetric. More... | |
| class | LoadedProbabilitiesMetricCreator |
| class | PerResidueBfactorMetric |
| Making a b factor per residue simple metric. More... | |
| class | PerResidueBfactorMetricCreator |
| class | PerResidueClashMetric |
| A SimpleMetric that calculates the total number of atom-atom clashes from a residue in a residue selector to all other residues defined in a second residue selector using the LJ radius of each atom. More... | |
| class | PerResidueDensityFitMetric |
| A per-residue metric that will calculate the density fit for each residue using either a correlation or a zscore. More... | |
| class | PerResidueEnergyMetric |
| A per-residue metric that will calculate/output per residue total energies or a specific score component. WEIGHTED. Correctly decomposes energies to per-residue. More... | |
| class | PerResidueGlycanLayerMetric |
| A metric that outputs the layer of the glycan tree as measured by the residue distance to the root. More... | |
| class | PerResidueRMSDMetric |
| A per-residue metric thtat will calculate the RMSD for each residue given in a residue selector to a reference pose. More... | |
| class | PerResidueSasaMetric |
| A per-residue metric that will calculate SASA for each residue given in a selector. More... | |
| class | ProbabilityConservationMetric |
| A metric for calculating the conservation of a position given some predicted probabilities (using the relative Shannon Entropy). More... | |
| class | ProbabilityConservationMetricCreator |
| class | SidechainNeighborCountMetric |
| A metric for calculating each sidechains neighbors based on cones. This metric uses the same core code as the LayerSelector. It can be combined with the SimpleMetricSelector to select any set of residues based on burial. More... | |
| class | SidechainNeighborCountMetricCreator |
| class | WaterMediatedHbondMetric |
| A metric to measure hydrogen bonds between a set of residues that are water-mediated. More... | |
| class | WaterMediatedHbondMetricCreator |
| class | HbondMetricCreator |
| class | PerResidueClashMetricCreator |
| class | PerResidueEnergyMetricCreator |
| class | PerResidueGlycanLayerMetricCreator |
| class | PerResidueSasaMetricCreator |
| class | PerResidueRMSDMetricCreator |
| class | PerResidueDensityFitMetricCreator |
| using core::simple_metrics::per_residue_metrics::CurrentProbabilityMetricCOP = typedef utility::pointer::shared_ptr< CurrentProbabilityMetric const > |
| using core::simple_metrics::per_residue_metrics::CurrentProbabilityMetricOP = typedef utility::pointer::shared_ptr< CurrentProbabilityMetric > |
| using core::simple_metrics::per_residue_metrics::HbondMetricCOP = typedef utility::pointer::shared_ptr< HbondMetric const > |
| using core::simple_metrics::per_residue_metrics::HbondMetricOP = typedef utility::pointer::shared_ptr< HbondMetric > |
| using core::simple_metrics::per_residue_metrics::LoadedProbabilitiesMetricCOP = typedef utility::pointer::shared_ptr< LoadedProbabilitiesMetric const > |
| using core::simple_metrics::per_residue_metrics::LoadedProbabilitiesMetricOP = typedef utility::pointer::shared_ptr< LoadedProbabilitiesMetric > |
| using core::simple_metrics::per_residue_metrics::PerResidueBfactorMetricCOP = typedef utility::pointer::shared_ptr< PerResidueBfactorMetric const > |
| using core::simple_metrics::per_residue_metrics::PerResidueBfactorMetricOP = typedef utility::pointer::shared_ptr< PerResidueBfactorMetric > |
| typedef utility::pointer::shared_ptr< PerResidueClashMetric const > core::simple_metrics::per_residue_metrics::PerResidueClashMetricCOP |
| typedef utility::pointer::shared_ptr< PerResidueClashMetric > core::simple_metrics::per_residue_metrics::PerResidueClashMetricOP |
| typedef utility::pointer::shared_ptr< PerResidueDensityFitMetric const > core::simple_metrics::per_residue_metrics::PerResidueDensityFitMetricCOP |
| typedef utility::pointer::shared_ptr< PerResidueDensityFitMetric > core::simple_metrics::per_residue_metrics::PerResidueDensityFitMetricOP |
| typedef utility::pointer::shared_ptr< PerResidueEnergyMetric const > core::simple_metrics::per_residue_metrics::PerResidueEnergyMetricCOP |
| typedef utility::pointer::shared_ptr< PerResidueEnergyMetric > core::simple_metrics::per_residue_metrics::PerResidueEnergyMetricOP |
| typedef utility::pointer::shared_ptr< PerResidueGlycanLayerMetric const > core::simple_metrics::per_residue_metrics::PerResidueGlycanLayerMetricCOP |
| typedef utility::pointer::shared_ptr< PerResidueGlycanLayerMetric > core::simple_metrics::per_residue_metrics::PerResidueGlycanLayerMetricOP |
| typedef utility::pointer::shared_ptr< PerResidueRMSDMetric const > core::simple_metrics::per_residue_metrics::PerResidueRMSDMetricCOP |
| typedef utility::pointer::shared_ptr< PerResidueRMSDMetric > core::simple_metrics::per_residue_metrics::PerResidueRMSDMetricOP |
| typedef utility::pointer::shared_ptr< PerResidueSasaMetric const > core::simple_metrics::per_residue_metrics::PerResidueSasaMetricCOP |
| typedef utility::pointer::shared_ptr< PerResidueSasaMetric > core::simple_metrics::per_residue_metrics::PerResidueSasaMetricOP |
| using core::simple_metrics::per_residue_metrics::ProbabilityConservationMetricCOP = typedef utility::pointer::shared_ptr< ProbabilityConservationMetric const > |
| using core::simple_metrics::per_residue_metrics::ProbabilityConservationMetricOP = typedef utility::pointer::shared_ptr< ProbabilityConservationMetric > |
| using core::simple_metrics::per_residue_metrics::SidechainNeighborCountMetricCOP = typedef utility::pointer::shared_ptr< SidechainNeighborCountMetric const > |
| using core::simple_metrics::per_residue_metrics::SidechainNeighborCountMetricOP = typedef utility::pointer::shared_ptr< SidechainNeighborCountMetric > |
| using core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetricCOP = typedef utility::pointer::shared_ptr< WaterMediatedHbondMetric const > |
| using core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetricOP = typedef utility::pointer::shared_ptr< WaterMediatedHbondMetric > |