protocols::drug_design::ReactionChemistry Member List

This is the complete list of members for protocols::drug_design::ReactionChemistry, including all inherited members.

add_reaction(::RDKit::ChemicalReactionOP rxn, core::Real weight)	protocols::drug_design::ReactionChemistry	virtual
apply(core::chemical::MutableResidueType &) override=0	protocols::drug_design::ReactionChemistry	pure virtual
protocols::chemistries::Chemistry::apply(core::chemical::MutableResidueType &restype, core::pose::Pose const &)	protocols::chemistries::Chemistry	inlinevirtual
Chemistry(std::string const &name)	protocols::chemistries::Chemistry	inline
ChemistryBase(std::string const &name)	core::chemical::modifications::ChemistryBase	inline
cleanup_product(::RDKit::RWMol &prod) const	protocols::drug_design::ReactionChemistry	protected
filter_reactions(::RDKit::ROMol const &rdmol, utility::vector1< ::RDKit::ChemicalReactionOP > &rxns, numeric::random::WeightedSampler &rxn_sampler) const	protocols::drug_design::ReactionChemistry	protected
get_additional_output()	core::chemical::modifications::ChemistryBase	inlinevirtual
get_last_status() const	core::chemical::modifications::ChemistryBase	inline
get_mapping() const override=0	protocols::drug_design::ReactionChemistry	pure virtual
get_reactions() const	protocols::drug_design::ReactionChemistry	protected
has_additional_output() const	core::chemical::modifications::ChemistryBase	inlinevirtual
last_status_	core::chemical::modifications::ChemistryBase	private
name() const	core::chemical::modifications::ChemistryBase	inline
name_	core::chemical::modifications::ChemistryBase	private
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &datacache) override=0	protocols::drug_design::ReactionChemistry	pure virtual
prefilter_reactions(utility::vector1< ::RDKit::ROMolOP > const &reactants, bool exclude_first=true)	protocols::drug_design::ReactionChemistry
reaction_file(std::string filename, bool append=false)	protocols::drug_design::ReactionChemistry	virtual
ReactionChemistry()	protocols::drug_design::ReactionChemistry	private
ReactionChemistry(std::string const &type)	protocols::drug_design::ReactionChemistry
reactions_	protocols::drug_design::ReactionChemistry	private
set_last_status(ChemistryStatus setting)	core::chemical::modifications::ChemistryBase	inline