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Rosetta
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This is the complete list of members for core::energy_methods::ResidualDipolarCouplingEnergy_Rohl, including all inherited members.
| assemble_datamatrix(pose::Pose const &pose, utility::vector1< core::scoring::RDC_Rohl > const &All_RDC_lines, ObjexxFCL::FArray2D< Real > &A, ObjexxFCL::FArray1D< Real > &b, ObjexxFCL::FArray1D< Real > &weights) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| atomic_interaction_cutoff() const | core::scoring::methods::WholeStructureEnergy | inlinevirtual |
| atomistic_energy(core::Size atmno, conformation::Residue const &rsd, pose::Pose const &pose, ScoreFunction const &scorefxn, EnergyMap &emap) const | core::scoring::methods::EnergyMethod | virtual |
| atomistic_pair_energy(core::Size atmno1, conformation::Residue const &rsd1, core::Size atomno2, conformation::Residue const &rsd2, pose::Pose const &pose, ScoreFunction const &scorefxn, EnergyMap &emap) const | core::scoring::methods::EnergyMethod | virtual |
| calc_dipscore(ObjexxFCL::FArray2D< Real > const &A, ObjexxFCL::FArray1D< Real > const &x, ObjexxFCL::FArray1D< Real > const &b, utility::vector1< core::scoring::RDC_Rohl > const &All_RDC_lines, Size const &ORDERSIZE, Real const &Azz) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| calc_ordermatrix(Size const &nrow, Size const &ORDERSIZE, ObjexxFCL::FArray2D< Real > &A, ObjexxFCL::FArray1D< Real > &b, ObjexxFCL::FArray1D< Real > &x, ObjexxFCL::FArray1D< Real > &weights, bool &reject) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| calc_orderparam(ObjexxFCL::FArray1D< Real > x, ObjexxFCL::FArray2D< Real > vec, Real &Azz, Real &eta) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| clone() const override | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | virtual |
| defines_high_order_terms(pose::Pose const &) const | core::scoring::methods::EnergyMethod | virtual |
| EnergyMethod(EnergyMethodCreatorOP creator) | core::scoring::methods::EnergyMethod | |
| eval_atom_derivative(id::AtomID const &id, pose::Pose const &pose, kinematics::DomainMap const &domain_map, ScoreFunction const &sfxn, EnergyMap const &emap, Vector &F1, Vector &F2) const | core::scoring::methods::EnergyMethod | virtual |
| eval_dipolar(pose::Pose &pose) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| finalize_after_derivatives(pose::Pose &, ScoreFunction const &) const | core::scoring::methods::EnergyMethod | virtual |
| finalize_after_minimizing(pose::Pose &pose) const | core::scoring::methods::EnergyMethod | virtual |
| finalize_total_energy(pose::Pose &pose, core::scoring::ScoreFunction const &, core::scoring::EnergyMap &totals) const override | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | virtual |
| has_atomistic_energies() const | core::scoring::methods::EnergyMethod | virtual |
| has_atomistic_pairwise_energies() const | core::scoring::methods::EnergyMethod | virtual |
| indicate_required_context_graphs(utility::vector1< bool > &) const override | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | inlinevirtual |
| method_type() const override | core::scoring::methods::WholeStructureEnergy | virtual |
| minimize_in_whole_structure_context(pose::Pose const &) const | core::scoring::methods::EnergyMethod | virtual |
| parent typedef | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | |
| prepare_rotamers_for_packing(pose::Pose const &, conformation::RotamerSetBase &) const | core::scoring::methods::EnergyMethod | virtual |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | core::scoring::methods::EnergyMethod | virtual |
| pythag(Real const &a, Real const &b) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| rdc_from_pose(pose::Pose &pose) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| requires_a_setup_for_scoring_for_residue_opportunity_during_regular_scoring(pose::Pose const &pose) const | core::scoring::methods::EnergyMethod | virtual |
| ResidualDipolarCouplingEnergy_Rohl() | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | |
| score_types() const | core::scoring::methods::EnergyMethod | inline |
| score_types_ | core::scoring::methods::EnergyMethod | private |
| set_score_types(EnergyMethodCreatorOP creator) | core::scoring::methods::EnergyMethod | protected |
| setup_for_derivatives(pose::Pose &pose, ScoreFunction const &sfxn) const | core::scoring::methods::EnergyMethod | virtual |
| setup_for_minimizing(pose::Pose &, ScoreFunction const &, kinematics::MinimizerMapBase const &) const | core::scoring::methods::EnergyMethod | virtual |
| setup_for_packing(pose::Pose &, utility::vector1< bool > const &, utility::vector1< bool > const &) const | core::scoring::methods::EnergyMethod | virtual |
| setup_for_packing_with_rotsets(pose::Pose &pose, pack_basic::RotamerSetsBaseOP const &rotsets, ScoreFunction const &sfxn) const | core::scoring::methods::EnergyMethod | virtual |
| setup_for_scoring(pose::Pose &, ScoreFunction const &) const | core::scoring::methods::EnergyMethod | virtual |
| setup_for_scoring_for_residue(conformation::Residue const &rsd, pose::Pose const &pose, ScoreFunction const &sfxn, basic::datacache::BasicDataCache &residue_data_cache) const | core::scoring::methods::EnergyMethod | virtual |
| show_additional_info(std::ostream &, pose::Pose &, bool) const | core::scoring::methods::EnergyMethod | virtual |
| svbksb(ObjexxFCL::FArray2D< Real > const &u, ObjexxFCL::FArray1D< Real > const &w, ObjexxFCL::FArray2D< Real > const &v, Size const &m, Size const &n, ObjexxFCL::FArray1D< Real > const &b, ObjexxFCL::FArray1D< Real > &x) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| svdcmp(ObjexxFCL::FArray2D< Real > &a, Size const &m, Size const &n, ObjexxFCL::FArray1D< Real > &w, ObjexxFCL::FArray2D< Real > &v) const | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | private |
| update_residue_for_packing(pose::Pose &, Size resid) const | core::scoring::methods::EnergyMethod | virtual |
| version() const override | core::energy_methods::ResidualDipolarCouplingEnergy_Rohl | privatevirtual |
| WholeStructureEnergy(EnergyMethodCreatorOP) | core::scoring::methods::WholeStructureEnergy | |
| ~WholeStructureEnergy() override | core::scoring::methods::WholeStructureEnergy | inline |
1.9.1