#include <UpstreamCollisionFilter.hh>

Inheritance diagram for protocols::match::output::MatchCollisionFilter:

[legend]

Public Types
typedef core::Real	Real

Public Member Functions
	MatchCollisionFilter (std::string filter_name, UpstreamHitCacherOP coordinate_cacher)

	~MatchCollisionFilter () override

bool	passes_filter (match const &m) const override=0
	Returns true if the given match passes this filter. More...

bool	passes_filter (match_dspos1 const &m) const override=0

void	set_filter_by_lj (bool setting)

void	set_lj_cutoff (Real setting)

void	set_lj_atr_weight (Real setting)

void	set_lj_rep_weight (Real setting)

void	set_lj_sol_weight (Real setting)

virtual void	set_tolerated_overlap (Real setting)

bool	filter_by_lj () const

Real	wfa_atr () const

Real	wfa_rep () const

Real	wfa_sol () const

Real	lj_cutoff () const

Real	tolerated_overlap () const

core::pose::PoseCOP	empty_pose () const

core::scoring::ScoreFunctionOP	empty_sfxn () const

core::scoring::methods::ShortRangeTwoBodyEnergyCOP	etable_energy () const

BumpGridCOP	bump_grid () const

Public Member Functions inherited from protocols::match::output::MatchFilter
	MatchFilter (std::string const &filter_name)

	~MatchFilter () override

std::string	filter_name () const

Protected Attributes
UpstreamHitCacherOP	cacher_

Member Typedef Documentation

◆ Real

typedef core::Real protocols::match::output::MatchCollisionFilter::Real

Constructor & Destructor Documentation

◆ MatchCollisionFilter()

protocols::match::output::MatchCollisionFilter::MatchCollisionFilter	(	std::string	filter_name,
		UpstreamHitCacherOP	coordinate_cacher
	)

◆ ~MatchCollisionFilter()

protocols::match::output::MatchCollisionFilter::~MatchCollisionFilter ( )

overridedefault

Member Function Documentation

◆ bump_grid()

BumpGridCOP protocols::match::output::MatchCollisionFilter::bump_grid ( ) const

References bump_grid_.

Referenced by protocols::match::output::UpstreamCollisionFilter::passes_hardsphere_filter(), protocols::match::output::UpstreamDownstreamCollisionFilter::passes_hardsphere_filter(), and protocols::match::output::UpstreamDownstreamCollisionFilter::set_tolerated_overlap().

◆ empty_pose()

core::pose::PoseCOP protocols::match::output::MatchCollisionFilter::empty_pose ( ) const

References empty_pose_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_filter().

◆ empty_sfxn()

core::scoring::ScoreFunctionOP protocols::match::output::MatchCollisionFilter::empty_sfxn ( ) const

References empty_sfxn_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_filter().

◆ etable_energy()

core::scoring::methods::ShortRangeTwoBodyEnergyCOP protocols::match::output::MatchCollisionFilter::etable_energy ( ) const

References etable_energy_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_filter().

◆ filter_by_lj()

bool protocols::match::output::MatchCollisionFilter::filter_by_lj ( ) const

References filter_by_lj_.

Referenced by protocols::match::output::UpstreamCollisionFilter::passes_filter(), and protocols::match::output::UpstreamDownstreamCollisionFilter::passes_filter().

◆ lj_cutoff()

MatchCollisionFilter::Real protocols::match::output::MatchCollisionFilter::lj_cutoff ( ) const

References lj_cutoff_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_filter().

◆ passes_filter() [1/2]

bool protocols::match::output::MatchCollisionFilter::passes_filter ( match const & m ) const

overridepure virtual

Returns true if the given match passes this filter.

Implements protocols::match::output::MatchFilter.

Implemented in protocols::match::output::UpstreamDownstreamCollisionFilter, and protocols::match::output::UpstreamCollisionFilter.

◆ passes_filter() [2/2]

bool protocols::match::output::MatchCollisionFilter::passes_filter ( match_dspos1 const & m ) const

overridepure virtual

Implements protocols::match::output::MatchFilter.

Implemented in protocols::match::output::UpstreamDownstreamCollisionFilter, and protocols::match::output::UpstreamCollisionFilter.

◆ set_filter_by_lj()

void protocols::match::output::MatchCollisionFilter::set_filter_by_lj ( bool setting )

References etable_energy_, and filter_by_lj_.

◆ set_lj_atr_weight()

void protocols::match::output::MatchCollisionFilter::set_lj_atr_weight ( Real setting )

References wfa_atr_.

◆ set_lj_cutoff()

void protocols::match::output::MatchCollisionFilter::set_lj_cutoff ( Real setting )

References lj_cutoff_.

◆ set_lj_rep_weight()

void protocols::match::output::MatchCollisionFilter::set_lj_rep_weight ( Real setting )

References wfa_rep_.

◆ set_lj_sol_weight()

void protocols::match::output::MatchCollisionFilter::set_lj_sol_weight ( Real setting )

References wfa_sol_.

◆ set_tolerated_overlap()

void protocols::match::output::MatchCollisionFilter::set_tolerated_overlap ( Real setting )

virtual

Reimplemented in protocols::match::output::UpstreamDownstreamCollisionFilter.

References bump_grid_, and tolerated_overlap_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::set_tolerated_overlap().

◆ tolerated_overlap()

MatchCollisionFilter::Real protocols::match::output::MatchCollisionFilter::tolerated_overlap ( ) const

References tolerated_overlap_.

◆ wfa_atr()

MatchCollisionFilter::Real protocols::match::output::MatchCollisionFilter::wfa_atr ( ) const

References wfa_atr_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_filter().

◆ wfa_rep()

MatchCollisionFilter::Real protocols::match::output::MatchCollisionFilter::wfa_rep ( ) const

References wfa_rep_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_filter().

◆ wfa_sol()

MatchCollisionFilter::Real protocols::match::output::MatchCollisionFilter::wfa_sol ( ) const

References wfa_sol_.

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_filter().

Member Data Documentation

◆ bump_grid_

BumpGridOP protocols::match::output::MatchCollisionFilter::bump_grid_

private

Referenced by bump_grid(), and set_tolerated_overlap().

◆ cacher_

UpstreamHitCacherOP protocols::match::output::MatchCollisionFilter::cacher_

protected

Referenced by protocols::match::output::UpstreamDownstreamCollisionFilter::passes_etable_filter(), protocols::match::output::UpstreamCollisionFilter::passes_filter(), protocols::match::output::UpstreamDownstreamCollisionFilter::passes_hardsphere_filter(), and protocols::match::output::UpstreamCollisionFilter::passes_hardsphere_filter().

◆ empty_pose_

core::pose::PoseOP protocols::match::output::MatchCollisionFilter::empty_pose_

private

Referenced by empty_pose().

◆ empty_sfxn_

core::scoring::ScoreFunctionOP protocols::match::output::MatchCollisionFilter::empty_sfxn_

private

Referenced by empty_sfxn().

◆ etable_energy_

core::scoring::methods::ShortRangeTwoBodyEnergyOP protocols::match::output::MatchCollisionFilter::etable_energy_

private

Referenced by etable_energy(), and set_filter_by_lj().

◆ filter_by_lj_

bool protocols::match::output::MatchCollisionFilter::filter_by_lj_

private

Referenced by filter_by_lj(), and set_filter_by_lj().

◆ lj_cutoff_

Real protocols::match::output::MatchCollisionFilter::lj_cutoff_

private

Referenced by lj_cutoff(), and set_lj_cutoff().

◆ tolerated_overlap_

Real protocols::match::output::MatchCollisionFilter::tolerated_overlap_

private

Referenced by set_tolerated_overlap(), and tolerated_overlap().

◆ wfa_atr_

Real protocols::match::output::MatchCollisionFilter::wfa_atr_

private

Referenced by set_lj_atr_weight(), and wfa_atr().

◆ wfa_rep_

Real protocols::match::output::MatchCollisionFilter::wfa_rep_

private

Referenced by set_lj_rep_weight(), and wfa_rep().

◆ wfa_sol_

Real protocols::match::output::MatchCollisionFilter::wfa_sol_

private

Referenced by set_lj_sol_weight(), and wfa_sol().

The documentation for this class was generated from the following files:

src/protocols/match/output/UpstreamCollisionFilter.hh
src/protocols/match/output/UpstreamCollisionFilter.cc

Private Attributes
bool	filter_by_lj_

Real	wfa_atr_

Real	wfa_rep_

Real	wfa_sol_

Real	lj_cutoff_

Real	tolerated_overlap_

core::pose::PoseOP	empty_pose_

core::scoring::ScoreFunctionOP	empty_sfxn_

core::scoring::methods::ShortRangeTwoBodyEnergyOP	etable_energy_

BumpGridOP	bump_grid_

Public Types

Public Member Functions

Protected Attributes

Private Attributes

Member Typedef Documentation

◆ Real

Constructor & Destructor Documentation

◆ MatchCollisionFilter()

◆ ~MatchCollisionFilter()

Member Function Documentation

◆ bump_grid()

◆ empty_pose()

◆ empty_sfxn()

◆ etable_energy()

◆ filter_by_lj()

◆ lj_cutoff()

◆ passes_filter() [1/2]

◆ passes_filter() [2/2]

◆ set_filter_by_lj()

◆ set_lj_atr_weight()

◆ set_lj_cutoff()

◆ set_lj_rep_weight()

◆ set_lj_sol_weight()

◆ set_tolerated_overlap()

◆ tolerated_overlap()

◆ wfa_atr()

◆ wfa_rep()

◆ wfa_sol()

Member Data Documentation

◆ bump_grid_

◆ cacher_

◆ empty_pose_

◆ empty_sfxn_

◆ etable_energy_

◆ filter_by_lj_

◆ lj_cutoff_

◆ tolerated_overlap_

◆ wfa_atr_

◆ wfa_rep_

◆ wfa_sol_