#include <MotifGraftMover.hh>

Public Member Functions
	MotifMatch ()

	MotifMatch (motif2scaffold_data data)

bool	operator< (const MotifMatch &other) const

motif2scaffold_data	get_scaffold_fragment_data () const

core::Real	get_RMSD () const

core::Real	get_motif_fragments_RMSD () const

core::Real	get_clash_score () const

bool	b_is_full_motif_bb_alignment () const

std::string	get_allow_independent_alignment_per_fragment_mode () const

std::string	get_full_motif_bb_alignment_mode () const

std::string	get_motif_ranges (core::Size const &ndx_shift) const

std::string	get_scaffold_ranges (core::Size const &ndx_shift) const

std::string	get_scaffold2motif_size_change () const

numeric::HomogeneousTransform< core::Real >	get_homogeneous_transform_com_from_orig (numeric::xyzVector< core::Real > com) const

Private Attributes
motif2scaffold_data	scaffold_fragment_data

core::Real	RMSD

core::Real	motif_fragments_RMSD

core::Real	clash_score

utility::vector1< motif2scaffold_indexes >	v_indexes

bool	b_allow_independent_alignment_per_fragment

bool	b_full_motif_bb_alignment

bool	b_graft_only_hotspots_by_sidechain_replacement

Constructor & Destructor Documentation

◆ MotifMatch() [1/2]

protocols::motif_grafting::movers::MotifMatch::MotifMatch ( )

inline

◆ MotifMatch() [2/2]

protocols::motif_grafting::movers::MotifMatch::MotifMatch ( motif2scaffold_data data )

inline

References protocols::motif_grafting::movers::motif2scaffold_data::b_allow_independent_alignment_per_fragment, b_allow_independent_alignment_per_fragment, protocols::motif_grafting::movers::motif2scaffold_data::b_full_motif_bb_alignment, b_full_motif_bb_alignment, protocols::motif_grafting::movers::motif2scaffold_data::b_graft_only_hotspots_by_sidechain_replacement, b_graft_only_hotspots_by_sidechain_replacement, protocols::motif_grafting::movers::motif2scaffold_data::clash_score, clash_score, protocols::motif_grafting::movers::motif2scaffold_data::motif_fragments_RMSD, motif_fragments_RMSD, protocols::motif_grafting::movers::motif2scaffold_data::RMSD, RMSD, scaffold_fragment_data, protocols::motif_grafting::movers::motif2scaffold_data::v_indexes, and v_indexes.

Member Function Documentation

◆ b_is_full_motif_bb_alignment()

bool protocols::motif_grafting::movers::MotifMatch::b_is_full_motif_bb_alignment ( ) const

inline

References b_full_motif_bb_alignment.

Referenced by protocols::motif_grafting::movers::MotifGraftMover::generate_match_pose().

◆ get_allow_independent_alignment_per_fragment_mode()

std::string protocols::motif_grafting::movers::MotifMatch::get_allow_independent_alignment_per_fragment_mode ( ) const

inline

References b_allow_independent_alignment_per_fragment.

◆ get_clash_score()

core::Real protocols::motif_grafting::movers::MotifMatch::get_clash_score ( ) const

inline

References clash_score.

Referenced by protocols::motif_grafting::movers::MotifGraftMover::generate_match_pose().

◆ get_full_motif_bb_alignment_mode()

std::string protocols::motif_grafting::movers::MotifMatch::get_full_motif_bb_alignment_mode ( ) const

inline

References b_full_motif_bb_alignment.

Referenced by protocols::motif_grafting::movers::MotifGraftMover::generate_match_pose().

◆ get_homogeneous_transform_com_from_orig()

numeric::HomogeneousTransform< core::Real > protocols::motif_grafting::movers::MotifMatch::get_homogeneous_transform_com_from_orig ( numeric::xyzVector< core::Real > com ) const

inline

References protocols::membrane::com(), protocols::motif_grafting::movers::motif2scaffold_data::RotM, scaffold_fragment_data, protocols::motif_grafting::movers::motif2scaffold_data::TvecA, and protocols::motif_grafting::movers::motif2scaffold_data::TvecB.

Referenced by protocols::motif_grafting::movers::MotifGraftMover::get_next_nonredundant_motifmatch().