core::pack::guidance_scoreterms::buried_unsat_penalty Namespace Reference

Namespaces
	graph

Classes
class	BuriedUnsatPenalty
	BuriedUnsatPenalty, an EnergyMethod that gives a penalty for buried unsatisfied hydrogen bond donors or acceptors. More...
class	BuriedUnsatPenaltyCreator

Typedefs
typedef utility::pointer::shared_ptr< BuriedUnsatPenalty >	BuriedUnsatPenaltyOP
typedef utility::pointer::shared_ptr< BuriedUnsatPenalty const >	BuriedUnsatPenaltyCOP

Functions
static basic::Tracer	TR ("core.pack.guidance_scoreterms.buried_unsat_penalty.BuriedUnsatPenalty")

Typedef Documentation

BuriedUnsatPenaltyCOP

typedef utility::pointer::shared_ptr< BuriedUnsatPenalty const > core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenaltyCOP

BuriedUnsatPenaltyOP

typedef utility::pointer::shared_ptr< BuriedUnsatPenalty > core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenaltyOP

Function Documentation

TR()

static basic::Tracer core::pack::guidance_scoreterms::buried_unsat_penalty::TR ( "core.pack.guidance_scoreterms.buried_unsat_penalty.BuriedUnsatPenalty"  )

static

Referenced by core::pack::guidance_scoreterms::buried_unsat_penalty::graph::BuriedUnsatPenaltyGraph::BuriedUnsatPenaltyGraph(), core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::calculate_energy(), core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::calculate_penalty_once_almost_from_scratch_using_reference_graph(), core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::calculate_penalty_once_from_scratch(), core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::clean_up_residuearrayannealableenergy_after_packing(), core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::finalize_after_minimizing(), core::pack::guidance_scoreterms::buried_unsat_penalty::graph::BuriedUnsatPenaltyGraph::initialize_graph_for_packing(), core::pack::guidance_scoreterms::buried_unsat_penalty::graph::BuriedUnsatPenaltyNode::initialize_node(), core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::report(), core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::set_up_residuearrayannealableenergy_for_packing(), and core::pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenalty::setup_for_minimizing().