core::scoring::sc Namespace Reference

Namespaces
	ElectrostaticComplementarityDefaults
	ElectrostaticSimilarityDefaults

Classes
class	ContactMolecularSurfaceCalculator
struct	ElectrostaticComplementarityResults
class	ElectrostaticComplementarityCalculator
struct	ElectrostaticSimilarityResults
class	ElectrostaticSimilarityCalculator
struct	CloserToAtom
	A small struct to report which of two atoms is closer to a given atom: More...
struct	_RESULTS
struct	_ATOM_RADIUS
struct	_DOT
struct	_PROBE
class	Atom
class	MolecularSurfaceCalculator
class	ShapeComplementarityCalculator
class	ShapeComplementarityCalculatorException
class	ShapeSimilarityCalculator

Typedefs
typedef utility::pointer::shared_ptr< ContactMolecularSurfaceCalculator >	ContactMolecularSurfaceCalculatorOP
typedef utility::pointer::shared_ptr< ContactMolecularSurfaceCalculator const >	ContactMolecularSurfaceCalculatorCOP
typedef utility::pointer::shared_ptr< ElectrostaticComplementarityCalculator >	ElectrostaticComplementarityCalculatorOP
typedef utility::pointer::shared_ptr< ElectrostaticComplementarityCalculator const >	ElectrostaticComplementarityCalculatorCOP
typedef utility::pointer::shared_ptr< ElectrostaticSimilarityCalculator >	ElectrostaticSimilarityCalculatorOP
typedef utility::pointer::shared_ptr< ElectrostaticSimilarityCalculator const >	ElectrostaticSimilarityCalculatorCOP
typedef utility::pointer::shared_ptr< MolecularSurfaceCalculator >	MolecularSurfaceCalculatorOP
typedef utility::pointer::shared_ptr< MolecularSurfaceCalculator const >	MolecularSurfaceCalculatorCOP
typedef struct core::scoring::sc::_RESULTS	RESULTS
typedef struct core::scoring::sc::_ATOM_RADIUS	ATOM_RADIUS
typedef struct core::scoring::sc::_DOT	DOT
typedef struct core::scoring::sc::_PROBE	PROBE
typedef utility::pointer::shared_ptr< ShapeComplementarityCalculator >	ShapeComplementarityCalculatorOP
typedef utility::pointer::shared_ptr< ShapeComplementarityCalculator const >	ShapeComplementarityCalculatorCOP
typedef utility::pointer::shared_ptr< ShapeSimilarityCalculator >	ShapeSimilarityCalculatorOP
typedef utility::pointer::shared_ptr< ShapeSimilarityCalculator const >	ShapeSimilarityCalculatorCOP

Enumerations
enum	__ATTEN_ENUM__ { ATTEN_BLOCKER = 1 , ATTEN_2 = 2 , ATTEN_BURIED_FLAGGED = 5 , ATTEN_6 = 6 }

Functions
void	get_n_neighbors (DOT const &dot1, std::vector< DOT > const &dots, Real distance, std::vector< Size > &neighbors, Size &n_neighbors)

Typedef Documentation

ATOM_RADIUS

typedef struct core::scoring::sc::_ATOM_RADIUS core::scoring::sc::ATOM_RADIUS

ContactMolecularSurfaceCalculatorCOP

typedef utility::pointer::shared_ptr< ContactMolecularSurfaceCalculator const > core::scoring::sc::ContactMolecularSurfaceCalculatorCOP

ContactMolecularSurfaceCalculatorOP

typedef utility::pointer::shared_ptr< ContactMolecularSurfaceCalculator > core::scoring::sc::ContactMolecularSurfaceCalculatorOP

DOT

typedef struct core::scoring::sc::_DOT core::scoring::sc::DOT

ElectrostaticComplementarityCalculatorCOP

typedef utility::pointer::shared_ptr< ElectrostaticComplementarityCalculator const > core::scoring::sc::ElectrostaticComplementarityCalculatorCOP

ElectrostaticComplementarityCalculatorOP

typedef utility::pointer::shared_ptr< ElectrostaticComplementarityCalculator > core::scoring::sc::ElectrostaticComplementarityCalculatorOP

ElectrostaticSimilarityCalculatorCOP

typedef utility::pointer::shared_ptr< ElectrostaticSimilarityCalculator const > core::scoring::sc::ElectrostaticSimilarityCalculatorCOP

ElectrostaticSimilarityCalculatorOP

typedef utility::pointer::shared_ptr< ElectrostaticSimilarityCalculator > core::scoring::sc::ElectrostaticSimilarityCalculatorOP

MolecularSurfaceCalculatorCOP

typedef utility::pointer::shared_ptr< MolecularSurfaceCalculator const > core::scoring::sc::MolecularSurfaceCalculatorCOP

MolecularSurfaceCalculatorOP

typedef utility::pointer::shared_ptr< MolecularSurfaceCalculator > core::scoring::sc::MolecularSurfaceCalculatorOP

PROBE

typedef struct core::scoring::sc::_PROBE core::scoring::sc::PROBE

RESULTS

typedef struct core::scoring::sc::_RESULTS core::scoring::sc::RESULTS

ShapeComplementarityCalculatorCOP

typedef utility::pointer::shared_ptr< ShapeComplementarityCalculator const > core::scoring::sc::ShapeComplementarityCalculatorCOP

ShapeComplementarityCalculatorOP

typedef utility::pointer::shared_ptr< ShapeComplementarityCalculator > core::scoring::sc::ShapeComplementarityCalculatorOP

ShapeSimilarityCalculatorCOP

typedef utility::pointer::shared_ptr< ShapeSimilarityCalculator const > core::scoring::sc::ShapeSimilarityCalculatorCOP

ShapeSimilarityCalculatorOP

typedef utility::pointer::shared_ptr< ShapeSimilarityCalculator > core::scoring::sc::ShapeSimilarityCalculatorOP

Enumeration Type Documentation

__ATTEN_ENUM__

enum core::scoring::sc::__ATTEN_ENUM__

Enumerator
ATTEN_BLOCKER
ATTEN_2
ATTEN_BURIED_FLAGGED
ATTEN_6

Function Documentation

get_n_neighbors()

void core::scoring::sc::get_n_neighbors	(	DOT const &	dot1,
		std::vector< DOT > const &	dots,
		Real	distance,
		std::vector< Size > &	neighbors,
		Size &	n_neighbors
	)

References core::scoring::sc::_DOT::buried, core::scoring::sc::_DOT::coor, and core::kinematics::distance().

Referenced by core::scoring::sc::ContactMolecularSurfaceCalculator::CalcContactMolecularSurface().