protocols::drug_design::MoleculeSubstitution Member List

This is the complete list of members for protocols::drug_design::MoleculeSubstitution, including all inherited members.

add_newmol(::RDKit::RWMolOP newmol)	protocols::drug_design::MoleculeSubstitution	inline
add_replacement(::RDKit::ROMolOP replacement, std::map< unsigned int, unsigned int > &r_to_t_mapping) const	protocols::drug_design::MoleculeSubstitution
add_template(::RDKit::ROMolOP templt, ::RDKit::MatchVectType const &pairings)	protocols::drug_design::MoleculeSubstitution
atom_substitutions_	protocols::drug_design::MoleculeSubstitution	private
by_mdx_	protocols::drug_design::MoleculeSubstitution	private
by_rdx_	protocols::drug_design::MoleculeSubstitution	private
by_tdx_	protocols::drug_design::MoleculeSubstitution	private
find_mdx_to_ndx_mapping() const	protocols::drug_design::MoleculeSubstitution
get_romol(MoleculeSelection sele)	protocols::drug_design::MoleculeSubstitution
make_match_vector() const	protocols::drug_design::MoleculeSubstitution
mol()	protocols::drug_design::MoleculeSubstitution	inline
mol_	protocols::drug_design::MoleculeSubstitution	private
MoleculeSubstitution()	protocols::drug_design::MoleculeSubstitution	inline
MoleculeSubstitution(::RDKit::ROMolOP mol)	protocols::drug_design::MoleculeSubstitution
newmol()	protocols::drug_design::MoleculeSubstitution	inline
newmol_	protocols::drug_design::MoleculeSubstitution	private
rdx_is_dummy(unsigned int rdx) const	protocols::drug_design::MoleculeSubstitution
replace()	protocols::drug_design::MoleculeSubstitution	inline
replace_	protocols::drug_design::MoleculeSubstitution	private
replace_dummies() const	protocols::drug_design::MoleculeSubstitution	inline
replace_dummies_	protocols::drug_design::MoleculeSubstitution	private
substitution_for_idx(MoleculeSelection sele, unsigned int idx)	protocols::drug_design::MoleculeSubstitution
substitution_for_mdx(unsigned int idx)	protocols::drug_design::MoleculeSubstitution
substitution_for_rdx(unsigned int idx)	protocols::drug_design::MoleculeSubstitution
substitution_for_tdx(unsigned int idx)	protocols::drug_design::MoleculeSubstitution
tdx_is_dummy(unsigned int tdx) const	protocols::drug_design::MoleculeSubstitution
template_dummies() const	protocols::drug_design::MoleculeSubstitution	inline
template_dummies_	protocols::drug_design::MoleculeSubstitution	private
templt()	protocols::drug_design::MoleculeSubstitution	inline
templt_	protocols::drug_design::MoleculeSubstitution	private