core::scoring::ResidueNeighborIterator Class Reference

#include <LREnergyContainer.hh>

Inheritance diagram for core::scoring::ResidueNeighborIterator:

Public Member Functions
	~ResidueNeighborIterator () override
virtual ResidueNeighborIterator &	operator= (ResidueNeighborIterator const &)=0
virtual ResidueNeighborIterator const &	operator++ ()=0
virtual bool	operator== (ResidueNeighborIterator const &) const =0
virtual bool	operator!= (ResidueNeighborIterator const &) const =0
virtual Size	upper_neighbor_id () const =0
virtual Size	lower_neighbor_id () const =0
virtual Size	residue_iterated_on () const =0
virtual Size	neighbor_id () const =0
virtual void	save_energy (EnergyMap const &)=0
virtual void	retrieve_energy (EnergyMap &) const =0
virtual void	accumulate_energy (EnergyMap &) const =0
virtual void	mark_energy_computed ()=0
virtual void	mark_energy_uncomputed ()=0
virtual bool	energy_computed () const =0

Constructor & Destructor Documentation

~ResidueNeighborIterator()

core::scoring::ResidueNeighborIterator::~ResidueNeighborIterator ( )

overridedefault

Member Function Documentation

accumulate_energy()

virtual void core::scoring::ResidueNeighborIterator::accumulate_energy ( EnergyMap &  ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::DenseNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

energy_computed()

virtual bool core::scoring::ResidueNeighborIterator::energy_computed ( ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

lower_neighbor_id()

virtual Size core::scoring::ResidueNeighborIterator::lower_neighbor_id ( ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

mark_energy_computed()

virtual void core::scoring::ResidueNeighborIterator::mark_energy_computed ( )

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

mark_energy_uncomputed()

virtual void core::scoring::ResidueNeighborIterator::mark_energy_uncomputed ( )

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

neighbor_id()

virtual Size core::scoring::ResidueNeighborIterator::neighbor_id ( ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

Referenced by core::scoring::DenseNeighborIterator::operator==(), core::scoring::OneToAllNeighborIterator::operator==(), and core::scoring::PolymerBondedNeighborIterator::operator==().

operator!=()

virtual bool core::scoring::ResidueNeighborIterator::operator!= ( ResidueNeighborIterator const &  ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::DenseNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

operator++()

virtual ResidueNeighborIterator const& core::scoring::ResidueNeighborIterator::operator++ ( )

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

operator=()

virtual ResidueNeighborIterator& core::scoring::ResidueNeighborIterator::operator= ( ResidueNeighborIterator const &  )

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::DenseNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

operator==()

virtual bool core::scoring::ResidueNeighborIterator::operator== ( ResidueNeighborIterator const &  ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::DenseNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

residue_iterated_on()

virtual Size core::scoring::ResidueNeighborIterator::residue_iterated_on ( ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

Referenced by core::scoring::DenseNeighborIterator::operator==(), core::scoring::OneToAllNeighborIterator::operator==(), and core::scoring::PolymerBondedNeighborIterator::operator==().

retrieve_energy()

virtual void core::scoring::ResidueNeighborIterator::retrieve_energy ( EnergyMap &  ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::DenseNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

save_energy()

virtual void core::scoring::ResidueNeighborIterator::save_energy ( EnergyMap const &  )

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::DenseNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

upper_neighbor_id()

virtual Size core::scoring::ResidueNeighborIterator::upper_neighbor_id ( ) const

pure virtual

Implemented in core::scoring::PolymerBondedNeighborIterator, core::scoring::OneToAllNeighborIterator, core::scoring::disulfides::DisulfResNeighbIterator, core::scoring::disulfides::DisulfideMatchingNeighborIterator, core::scoring::disulfides::CentroidDisulfideNeighborIterator, core::scoring::DenseNeighborIterator, and core::scoring::constraints::CstResNeighbIterator.

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The documentation for this class was generated from the following files:

• src/core/scoring/LREnergyContainer.hh
• src/core/scoring/LREnergyContainer.cc