core::pose::rna::BaseStack Class Reference

#include <BaseStack.hh>

Inheritance diagram for core::pose::rna::BaseStack:

Public Member Functions
	BaseStack ()
	BaseStack (core::Size const &res1, core::Size const &res2, core::chemical::rna::BaseDoubletOrientation const &orientation, core::chemical::rna::BaseStackWhichSide const &which_side)
	~BaseStack () override
BaseStack	flipped () const
void	set_res1 (core::Size const &setting)
core::Size	res1 () const
void	set_res2 (core::Size const &setting)
core::Size	res2 () const
void	set_orientation (core::chemical::rna::BaseDoubletOrientation const &setting)
core::chemical::rna::BaseDoubletOrientation	orientation () const
void	set_which_side (core::chemical::rna::BaseStackWhichSide const &setting)
core::chemical::rna::BaseStackWhichSide	which_side () const

Private Attributes
Size	res1_
Size	res2_
core::chemical::rna::BaseDoubletOrientation	orientation_
core::chemical::rna::BaseStackWhichSide	which_side_

Friends
bool	operator< (BaseStack const &lhs, BaseStack const &rhs)
std::ostream &	operator<< (std::ostream &out, BaseStack const &s)

Constructor & Destructor Documentation

BaseStack() [1/2]

core::pose::rna::BaseStack::BaseStack

(

)

Referenced by flipped().

BaseStack() [2/2]

core::pose::rna::BaseStack::BaseStack ( core::Size const &  res1, core::Size const &  res2, core::chemical::rna::BaseDoubletOrientation const &  orientation, core::chemical::rna::BaseStackWhichSide const &  which_side  )

inline

~BaseStack()

core::pose::rna::BaseStack::~BaseStack ( )

inlineoverride

Member Function Documentation

flipped()

BaseStack core::pose::rna::BaseStack::flipped

(

)

const

References core::chemical::rna::ABOVE, core::chemical::rna::ANTIPARALLEL, core::chemical::rna::ANY_BASE_STACK_SIDE, BaseStack(), core::chemical::rna::BELOW, orientation_, core::chemical::rna::PARALLEL, res1_, res2_, and which_side_.

orientation()

core::chemical::rna::BaseDoubletOrientation core::pose::rna::BaseStack::orientation ( ) const

inline

References orientation_.

res1()

core::Size core::pose::rna::BaseStack::res1 ( ) const

inline

References res1_.

Referenced by core::scoring::rna::data::RNA_DMS_LowResolutionPotential::get_rna_base_pairing_status().

res2()

core::Size core::pose::rna::BaseStack::res2 ( ) const

inline

References res2_.

Referenced by core::scoring::rna::data::RNA_DMS_LowResolutionPotential::get_rna_base_pairing_status().

set_orientation()

void core::pose::rna::BaseStack::set_orientation ( core::chemical::rna::BaseDoubletOrientation const &  setting )

inline

References orientation_.

Referenced by core::pose::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_stacks_to_score().

set_res1()

void core::pose::rna::BaseStack::set_res1 ( core::Size const &  setting )

inline

References res1_.

Referenced by core::pose::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_stacks_to_score().

set_res2()

void core::pose::rna::BaseStack::set_res2 ( core::Size const &  setting )

inline

References res2_.

Referenced by core::pose::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_stacks_to_score().

set_which_side()

void core::pose::rna::BaseStack::set_which_side ( core::chemical::rna::BaseStackWhichSide const &  setting )

inline

References which_side_.

Referenced by core::pose::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_stacks_to_score().

which_side()

core::chemical::rna::BaseStackWhichSide core::pose::rna::BaseStack::which_side ( ) const

inline

References which_side_.

Friends And Related Function Documentation

operator<

bool operator< ( BaseStack const &  lhs, BaseStack const &  rhs  )

friend

operator<<

std::ostream& operator<< ( std::ostream &  out, BaseStack const &  s  )

friend

Member Data Documentation

orientation_

core::chemical::rna::BaseDoubletOrientation core::pose::rna::BaseStack::orientation_

private

Referenced by flipped(), orientation(), and set_orientation().

res1_

Size core::pose::rna::BaseStack::res1_

private

Referenced by flipped(), res1(), and set_res1().

res2_

Size core::pose::rna::BaseStack::res2_

private

Referenced by flipped(), res2(), and set_res2().

which_side_

core::chemical::rna::BaseStackWhichSide core::pose::rna::BaseStack::which_side_

private

Referenced by flipped(), set_which_side(), and which_side().

---

The documentation for this class was generated from the following files:

• src/core/pose/rna/BaseStack.hh
• src/core/pose/rna/BaseStack.cc