core::pose::rna::VDW_Grid Class Reference

#include <VDW_Grid.hh>

Inheritance diagram for core::pose::rna::VDW_Grid:

Public Member Functions
	VDW_Grid ()
	VDW_Grid (VDW_Grid const &src)
	~VDW_Grid () override
void	setup (int const bin_max) const
void	reset () const
void	reset (utility::vector1< Atom_Bin > const &occupied_xyz_bins_) const
core::Size	size () const
bool	get_bin (int const x, int const y, int const z) const
void	set_bin (int const x, int const y, int const z, bool const value) const
bool	get_xyz_bin (Atom_Bin const &xyz_bin) const
void	set_xyz_bin (Atom_Bin const &xyz_bin, bool const value) const
bool	is_occupied () const
void	set_bin_max (int const value) const
int	get_bin_max () const
void	set_atom_bin_size (core::Real const value) const
core::Real	get_atom_bin_size () const
void	set_bin_offset (int const value) const
int	get_bin_offset () const
void	set_ref_xyz (numeric::xyzVector< core::Real > const &value) const
numeric::xyzVector< core::Real >	get_ref_xyz () const

Private Attributes
utility::vector1< utility::vector1< utility::vector1< bool > > >	bins_
bool	is_occupied_
int	bin_max_
core::Real	atom_bin_size_
int	bin_offset_
numeric::xyzVector< core::Real >	ref_xyz_

Constructor & Destructor Documentation

VDW_Grid() [1/2]

core::pose::rna::VDW_Grid::VDW_Grid

(

)

References bins_.

VDW_Grid() [2/2]

core::pose::rna::VDW_Grid::VDW_Grid

(

VDW_Grid const &

src

)

~VDW_Grid()

core::pose::rna::VDW_Grid::~VDW_Grid ( )

overridedefault

Member Function Documentation

get_atom_bin_size()

core::Real core::pose::rna::VDW_Grid::get_atom_bin_size

(

)

const

References atom_bin_size_.

get_bin()

bool core::pose::rna::VDW_Grid::get_bin	(	int const	x,
		int const	y,
		int const	z
	)		const

References bins_.

Referenced by get_xyz_bin().

get_bin_max()

int core::pose::rna::VDW_Grid::get_bin_max

(

)

const

References bin_max_.

get_bin_offset()

int core::pose::rna::VDW_Grid::get_bin_offset

(

)

const

References bin_offset_.

get_ref_xyz()

numeric::xyzVector< core::Real > core::pose::rna::VDW_Grid::get_ref_xyz

(

)

const

References ref_xyz_.

get_xyz_bin()

bool core::pose::rna::VDW_Grid::get_xyz_bin

(

Atom_Bin const &

xyz_bin

)

const

References get_bin(), core::pose::rna::Atom_Bin::x, core::pose::rna::Atom_Bin::y, and core::pose::rna::Atom_Bin::z.

is_occupied()

bool core::pose::rna::VDW_Grid::is_occupied

(

)

const

References is_occupied_.

reset() [1/2]

void core::pose::rna::VDW_Grid::reset

(

)

const

References bins_, is_occupied_, and set_bin().

reset() [2/2]

void core::pose::rna::VDW_Grid::reset

(

utility::vector1< Atom_Bin > const &

occupied_xyz_bins_

)

const

References is_occupied_, and set_xyz_bin().

set_atom_bin_size()

void core::pose::rna::VDW_Grid::set_atom_bin_size

(

core::Real const

value

)

const

References atom_bin_size_.

set_bin()

void core::pose::rna::VDW_Grid::set_bin	(	int const	x,
		int const	y,
		int const	z,
		bool const	value
	)		const

References bins_, and is_occupied_.

Referenced by reset(), and set_xyz_bin().

set_bin_max()

void core::pose::rna::VDW_Grid::set_bin_max

(

int const

value

)

const

References bin_max_.

set_bin_offset()

void core::pose::rna::VDW_Grid::set_bin_offset

(

int const

value

)

const

References bin_offset_.

set_ref_xyz()

void core::pose::rna::VDW_Grid::set_ref_xyz

(

numeric::xyzVector< core::Real > const &

value

)

const

References ref_xyz_.

set_xyz_bin()

void core::pose::rna::VDW_Grid::set_xyz_bin	(	Atom_Bin const &	xyz_bin,
		bool const	value
	)		const

References set_bin(), core::pose::rna::Atom_Bin::x, core::pose::rna::Atom_Bin::y, and core::pose::rna::Atom_Bin::z.

Referenced by reset().

setup()

void core::pose::rna::VDW_Grid::setup

(

int const

bin_max

)

const

References bin_max_, and bins_.

size()

core::Size core::pose::rna::VDW_Grid::size

(

)

const

References bins_.

Member Data Documentation

atom_bin_size_

core::Real core::pose::rna::VDW_Grid::atom_bin_size_

mutableprivate

Referenced by get_atom_bin_size(), and set_atom_bin_size().

bin_max_

int core::pose::rna::VDW_Grid::bin_max_

mutableprivate

Referenced by get_bin_max(), set_bin_max(), and setup().

bin_offset_

int core::pose::rna::VDW_Grid::bin_offset_

mutableprivate

Referenced by get_bin_offset(), and set_bin_offset().

bins_

utility::vector1< utility::vector1< utility::vector1< bool > > > core::pose::rna::VDW_Grid::bins_

mutableprivate

Referenced by get_bin(), reset(), set_bin(), setup(), size(), and VDW_Grid().

is_occupied_

bool core::pose::rna::VDW_Grid::is_occupied_

mutableprivate

Referenced by is_occupied(), reset(), and set_bin().

ref_xyz_

numeric::xyzVector< core::Real > core::pose::rna::VDW_Grid::ref_xyz_

mutableprivate

Referenced by get_ref_xyz(), and set_ref_xyz().

---

The documentation for this class was generated from the following files:

• src/core/pose/rna/VDW_Grid.hh
• src/core/pose/rna/VDW_Grid.cc