core::scoring::disulfides::DisulfResNeighbIterator Class Reference

#include <FullatomDisulfideEnergyContainer.hh>

Inheritance diagram for core::scoring::disulfides::DisulfResNeighbIterator:

Public Member Functions
	DisulfResNeighbIterator (FullatomDisulfideEnergyContainer *owner, Size focused_node, Size disulfide_index)
	DisulfResNeighbIterator (FullatomDisulfideEnergyContainer *owner)
	~DisulfResNeighbIterator () override
ResidueNeighborIterator &	operator= (ResidueNeighborIterator const &) override
ResidueNeighborIterator const &	operator++ () override
bool	operator== (ResidueNeighborIterator const &) const override
bool	operator!= (ResidueNeighborIterator const &) const override
Size	upper_neighbor_id () const override
Size	lower_neighbor_id () const override
Size	residue_iterated_on () const override
Size	neighbor_id () const override
void	save_energy (EnergyMap const &) override
void	retrieve_energy (EnergyMap &) const override
void	accumulate_energy (EnergyMap &) const override
void	mark_energy_computed () override
void	mark_energy_uncomputed () override
bool	energy_computed () const override
Public Member Functions inherited from core::scoring::ResidueNeighborIterator
	~ResidueNeighborIterator () override

Private Member Functions
DisulfResNeighbIterator &	operator= (DisulfResNeighbIterator const &)

Private Attributes
FullatomDisulfideEnergyContainer *	owner_
Size	focused_residue_
Size	disulfide_index_

Constructor & Destructor Documentation

DisulfResNeighbIterator() [1/2]

core::scoring::disulfides::DisulfResNeighbIterator::DisulfResNeighbIterator	(	FullatomDisulfideEnergyContainer *	owner,
		Size	focused_node,
		Size	disulfide_index
	)

DisulfResNeighbIterator() [2/2]

core::scoring::disulfides::DisulfResNeighbIterator::DisulfResNeighbIterator

(

FullatomDisulfideEnergyContainer *

owner

)

~DisulfResNeighbIterator()

core::scoring::disulfides::DisulfResNeighbIterator::~DisulfResNeighbIterator ( )

overridedefault

Member Function Documentation

accumulate_energy()

void core::scoring::disulfides::DisulfResNeighbIterator::accumulate_energy ( EnergyMap &  emap ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References core::scoring::disulfides::FullatomDisulfideEnergyContainer::accumulate_energy(), disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, and owner_.

energy_computed()

bool core::scoring::disulfides::DisulfResNeighbIterator::energy_computed ( ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::energy_computed(), core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, and owner_.

lower_neighbor_id()

Size core::scoring::disulfides::DisulfResNeighbIterator::lower_neighbor_id ( ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::lower_neighbor_id(), core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, and owner_.

mark_energy_computed()

void core::scoring::disulfides::DisulfResNeighbIterator::mark_energy_computed ( )

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::mark_energy_computed(), core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, and owner_.

mark_energy_uncomputed()

void core::scoring::disulfides::DisulfResNeighbIterator::mark_energy_uncomputed ( )

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::mark_energy_uncomputed(), core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, and owner_.

neighbor_id()

Size core::scoring::disulfides::DisulfResNeighbIterator::neighbor_id ( ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, focused_residue_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::other_neighbor_id(), and owner_.

operator!=()

bool core::scoring::disulfides::DisulfResNeighbIterator::operator!= ( ResidueNeighborIterator const &  rhs ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, focused_residue_, and owner_.

operator++()

ResidueNeighborIterator const & core::scoring::disulfides::DisulfResNeighbIterator::operator++ ( )

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, focused_residue_, and core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE.

operator=() [1/2]

DisulfResNeighbIterator& core::scoring::disulfides::DisulfResNeighbIterator::operator= ( DisulfResNeighbIterator const &  )

private

operator=() [2/2]

ResidueNeighborIterator & core::scoring::disulfides::DisulfResNeighbIterator::operator= ( ResidueNeighborIterator const &  rhs )

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, focused_residue_, and owner_.

operator==()

bool core::scoring::disulfides::DisulfResNeighbIterator::operator== ( ResidueNeighborIterator const &  rhs ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, focused_residue_, and owner_.

residue_iterated_on()

Size core::scoring::disulfides::DisulfResNeighbIterator::residue_iterated_on ( ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References focused_residue_.

retrieve_energy()

void core::scoring::disulfides::DisulfResNeighbIterator::retrieve_energy ( EnergyMap &  emap ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, owner_, and core::scoring::disulfides::FullatomDisulfideEnergyContainer::retrieve_energy().

save_energy()

void core::scoring::disulfides::DisulfResNeighbIterator::save_energy ( EnergyMap const &  emap )

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, owner_, and core::scoring::disulfides::FullatomDisulfideEnergyContainer::save_energy().

upper_neighbor_id()

Size core::scoring::disulfides::DisulfResNeighbIterator::upper_neighbor_id ( ) const

overridevirtual

Implements core::scoring::ResidueNeighborIterator.

References disulfide_index_, core::scoring::disulfides::FullatomDisulfideEnergyContainer::NO_DISULFIDE, owner_, and core::scoring::disulfides::FullatomDisulfideEnergyContainer::upper_neighbor_id().

Member Data Documentation

disulfide_index_

Size core::scoring::disulfides::DisulfResNeighbIterator::disulfide_index_

private

Referenced by accumulate_energy(), energy_computed(), lower_neighbor_id(), mark_energy_computed(), mark_energy_uncomputed(), neighbor_id(), operator!=(), operator++(), operator=(), operator==(), retrieve_energy(), save_energy(), and upper_neighbor_id().

focused_residue_

Size core::scoring::disulfides::DisulfResNeighbIterator::focused_residue_

private

Referenced by neighbor_id(), operator!=(), operator++(), operator=(), operator==(), and residue_iterated_on().

owner_

FullatomDisulfideEnergyContainer* core::scoring::disulfides::DisulfResNeighbIterator::owner_

private

Referenced by accumulate_energy(), energy_computed(), lower_neighbor_id(), mark_energy_computed(), mark_energy_uncomputed(), neighbor_id(), operator!=(), operator=(), operator==(), retrieve_energy(), save_energy(), and upper_neighbor_id().

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The documentation for this class was generated from the following files:

• src/core/scoring/disulfides/FullatomDisulfideEnergyContainer.hh
• src/core/scoring/disulfides/FullatomDisulfideEnergyContainer.cc