protocols::fold_from_loops::movers::NubInitioLoopClosureMover Member List

This is the complete list of members for protocols::fold_from_loops::movers::NubInitioLoopClosureMover, including all inherited members.

active_movable_residues(core::pose::Pose const &pose)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
active_packable_residues() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
altered_residues_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
apply(core::pose::Pose &pose) override	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	virtual
apply_closure_trust(core::pose::Pose &pose, bool by_variant=false) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
break_side() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
break_side(core::Real value)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
break_side_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
break_side_ramp() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
break_side_ramp(bool pick)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
break_side_ramp_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
break_side_ramp_value_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
centroid() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
centroid(bool pick)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
centroid_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
centroid_scorefxn() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
centroid_scorefxn(core::scoring::ScoreFunctionOP const &scorefxn)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
centroid_scorefxn_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	virtual
create()	protocols::moves::Mover	virtual
current_job_	protocols::moves::Mover	private
current_tag_	protocols::moves::Mover	private
default_break_side()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_break_side_ramp()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_centroid()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_centroid_chainclosure_weight()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_centroid_scorefxn()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_design()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_fullatom_scorefxn()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_label()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_max_trials()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
default_trust()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
design() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
design(bool pick)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
design_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
fragments() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
fragments(core::fragment::FragSetOP frags)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
fragments_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
fragments_id() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
fragments_id(std::string const &name)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
fragments_id_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
fresh_instance() const override	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	virtual
fullatom_scorefxn() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
fullatom_scorefxn(core::scoring::ScoreFunctionOP const &scorefxn)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
fullatom_scorefxn_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
has_cutpoints(core::pose::Pose const &pose) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
has_movable_residues(core::pose::Pose const &pose) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
info_	protocols::moves::Mover	private
input_pose_	protocols::moves::Mover	private
is_cutpoint_close(core::pose::Pose const &pose, core::Size const &residue, bool by_variant=false) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
label() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
label(bool pick)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
label_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
last_status_	protocols::moves::Mover	private
loop_closure_movemap(core::pose::Pose const &pose)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
make_cutpoints_coherent_to_foldtree(core::pose::Pose &pose) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
make_final_tree(core::pose::Pose const &pose) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
make_foldtree_coherent_to_cutpoints(core::pose::Pose &pose) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
max_trials(core::Size choice)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
max_trials() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
max_trials_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
movable_residues() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	static
name()	protocols::moves::Mover	inlinestatic
native_pose_	protocols::moves::Mover	private
NubInitioLoopClosureMover()	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
packable_residues() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	static
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
repack(core::pose::Pose &pose)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
reset_status()	protocols::moves::Mover
set_centroid_default_chainclosure_weight(core::scoring::ScoreFunctionOP const &scorefxn)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	privatestatic
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
show_cutpoints(core::pose::Pose const &pose) const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
trust() const	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
trust(bool pick)	protocols::fold_from_loops::movers::NubInitioLoopClosureMover
trust_	protocols::fold_from_loops::movers::NubInitioLoopClosureMover	private
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
type_	protocols::moves::Mover	private
~NubInitioLoopClosureMover() override	protocols::fold_from_loops::movers::NubInitioLoopClosureMover