protocols::antibody::design::ResnumFromStringsWithRangesSelector Class Reference

A selector which uses the protocols::antibody::design::get_resnums_from_strings_with_ranges() approach. More...

#include <ResnumFromStringsWithRangesSelector.hh>

Inheritance diagram for protocols::antibody::design::ResnumFromStringsWithRangesSelector:

Public Types
typedef core::select::residue_selector::ResidueSelectorOP	ResidueSelectorOP
typedef core::select::residue_selector::ResidueSubset	ResidueSubset

Public Member Functions
	ResnumFromStringsWithRangesSelector ()
	Constructor. More...
	ResnumFromStringsWithRangesSelector (utility::vector1< std::string > const &pdb_residues)
ResidueSelectorOP	clone () const override
	Clone operator. More...
ResidueSubset	apply (core::pose::Pose const &pose) const override
	"Apply" function. More...
void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &datamap) override
	XML parse. More...
std::string	get_name () const override
	Get the mover class name. More...
Public Member Functions inherited from core::select::residue_selector::ResidueSelector
	ResidueSelector ()
	Constructor. More...
	~ResidueSelector () override
	Destructor. More...
utility::vector1< core::Size >	selection_positions (core::pose::Pose const &pose) const
	Calls apply and returns the Rosetta numbering corresponding to the selected residues. More...
virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static std::string	class_name ()
	Get the mover class name. More...
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
	Provide XSD information, enabling mechanical validation of input XML. More...

Private Attributes
utility::vector1< std::string >	pdb_residues_

Detailed Description

A selector which uses the protocols::antibody::design::get_resnums_from_strings_with_ranges() approach.

Member Typedef Documentation

ResidueSelectorOP

typedef core::select::residue_selector::ResidueSelectorOP protocols::antibody::design::ResnumFromStringsWithRangesSelector::ResidueSelectorOP

ResidueSubset

typedef core::select::residue_selector::ResidueSubset protocols::antibody::design::ResnumFromStringsWithRangesSelector::ResidueSubset

Constructor & Destructor Documentation

ResnumFromStringsWithRangesSelector() [1/2]

protocols::antibody::design::ResnumFromStringsWithRangesSelector::ResnumFromStringsWithRangesSelector ( )

default

Constructor.

ResnumFromStringsWithRangesSelector() [2/2]

protocols::antibody::design::ResnumFromStringsWithRangesSelector::ResnumFromStringsWithRangesSelector

(

utility::vector1< std::string > const &

pdb_residues

)

Member Function Documentation

apply()

ResnumFromStringsWithRangesSelector::ResidueSubset protocols::antibody::design::ResnumFromStringsWithRangesSelector::apply ( core::pose::Pose const &  pose ) const

overridevirtual

"Apply" function.

Return the set subset.

Given the pose, generate a vector of bools with entries for every residue in the pose indicating whether each residue is selected ("true") or not ("false").

Implements core::select::residue_selector::ResidueSelector.

References protocols::antibody::design::get_resnums_from_strings_with_ranges(), and pdb_residues_.

class_name()

std::string protocols::antibody::design::ResnumFromStringsWithRangesSelector::class_name ( )

static

Get the mover class name.

Referenced by get_name().

clone()

ResnumFromStringsWithRangesSelector::ResidueSelectorOP protocols::antibody::design::ResnumFromStringsWithRangesSelector::clone ( ) const

overridevirtual

Clone operator.

Clone function.

Copy the current object (creating the copy on the heap) and return an owning pointer to the copy. All ResidueSelectors must implement this.

Copy this object and return owning pointer to the copy (created on the heap).

Implements core::select::residue_selector::ResidueSelector.

get_name()

std::string protocols::antibody::design::ResnumFromStringsWithRangesSelector::get_name ( ) const

overridevirtual

Get the mover class name.

Implements core::select::residue_selector::ResidueSelector.

References class_name().

parse_my_tag()

void protocols::antibody::design::ResnumFromStringsWithRangesSelector::parse_my_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &  datamap  )

overridevirtual

XML parse.

Parse RosettaScripts tags and set up this mover.

Reimplemented from core::select::residue_selector::ResidueSelector.

provide_xml_schema()

void protocols::antibody::design::ResnumFromStringsWithRangesSelector::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

Provide XSD information, enabling mechanical validation of input XML.

Member Data Documentation

pdb_residues_

utility::vector1<std::string> protocols::antibody::design::ResnumFromStringsWithRangesSelector::pdb_residues_

private

Referenced by apply().

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The documentation for this class was generated from the following files:

• src/protocols/antibody/design/ResnumFromStringsWithRangesSelector.hh
• src/protocols/antibody/design/ResnumFromStringsWithRangesSelector.cc