protocols::hybridization::ChunkTrialMover Member List

This is the complete list of members for protocols::hybridization::ChunkTrialMover, including all inherited members.

align_chunk_	protocols::hybridization::ChunkTrialMover	private
align_option_	protocols::hybridization::ChunkTrialMover	private
apply(core::pose::Pose &pose) override	protocols::hybridization::ChunkTrialMover	virtual
ChunkTrialMover(utility::vector1< core::pose::PoseCOP > const &template_poses, utility::vector1< protocols::loops::Loops > const &template_chunks, bool random_template=true, AlignOption align_option=all_chunks, utility::vector1< bool > residue_sample_template=utility::vector1< bool >())	protocols::hybridization::ChunkTrialMover
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
create()	protocols::moves::Mover	virtual
current_job_	protocols::moves::Mover	private
current_tag_	protocols::moves::Mover	private
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_alignment_from_template(core::pose::PoseCOP template_pose, std::map< core::Size, core::Size > &seqpos_alignment)	protocols::hybridization::ChunkTrialMover
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::hybridization::ChunkTrialMover	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
has_valid_moves()	protocols::hybridization::ChunkTrialMover	inline
has_valid_moves_	protocols::hybridization::ChunkTrialMover	private
highest_tmpl_resnum_	protocols::hybridization::ChunkTrialMover	private
ignore_template_indices_	protocols::hybridization::ChunkTrialMover	private
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
info_	protocols::moves::Mover	private
input_pose_	protocols::moves::Mover	private
jump_number_	protocols::hybridization::ChunkTrialMover	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
last_status_	protocols::moves::Mover	private
max_registry_shift_global_	protocols::hybridization::ChunkTrialMover	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
native_pose_	protocols::moves::Mover	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
pick_random_chunk(core::pose::Pose &pose)	protocols::hybridization::ChunkTrialMover
pick_random_template()	protocols::hybridization::ChunkTrialMover
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
random_template_	protocols::hybridization::ChunkTrialMover	private
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
residue_covered_by_template_	protocols::hybridization::ChunkTrialMover	private
sampling_chunk_	protocols::hybridization::ChunkTrialMover	private
sequence_alignments_	protocols::hybridization::ChunkTrialMover	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_max_registry_shift(core::Size max_registry_shift_in)	protocols::hybridization::ChunkTrialMover
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_template(core::Size const template_number)	protocols::hybridization::ChunkTrialMover
set_templates_to_ignore(std::set< core::Size > template_indices_in)	protocols::hybridization::ChunkTrialMover	inline
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
template_chunks_	protocols::hybridization::ChunkTrialMover	private
template_number()	protocols::hybridization::ChunkTrialMover
template_number_	protocols::hybridization::ChunkTrialMover	private
template_poses_	protocols::hybridization::ChunkTrialMover	private
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
trial_counter(core::Size ires)	protocols::hybridization::ChunkTrialMover
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
type_	protocols::moves::Mover	private