SequenceMetric.fwd.hh File Reference

A SimpleMetric to output the single-letter OR three-letter sequence of a protein or subset of positions/regions using a ResidueSelector. More...

#include <utility/pointer/owning_ptr.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::simple_metrics
	core::simple_metrics::metrics

Typedefs
typedef utility::pointer::shared_ptr< SequenceMetric >	core::simple_metrics::metrics::SequenceMetricOP
typedef utility::pointer::shared_ptr< SequenceMetric const >	core::simple_metrics::metrics::SequenceMetricCOP

Enumerations
enum class	core::simple_metrics::metrics::SequenceMetricMode {   core::simple_metrics::metrics::ONELETTER_CODE =1 , core::simple_metrics::metrics::THREELETTER_CODE , core::simple_metrics::metrics::BASE_NAME , core::simple_metrics::metrics::FULL_NAME ,   core::simple_metrics::metrics::INVALID_MODE , core::simple_metrics::metrics::END_OF_LIST = INVALID_MODE }
	The mode for this metric. If you add to this list, be sure to update the map associating this enum with corresponding strings in the .cc file. More...

Detailed Description

A SimpleMetric to output the single-letter OR three-letter sequence of a protein or subset of positions/regions using a ResidueSelector.

Author

Jared Adolf-Bryfogle (jadol.nosp@m.fbr@.nosp@m.gmail.nosp@m..com)

Vikram K. Mulligan (vmull.nosp@m.igan.nosp@m.@flat.nosp@m.iron.nosp@m.insti.nosp@m.tute.nosp@m..org) – Added support for writing full residue type names or basenames.