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Rosetta
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This is the complete list of members for protocols::cyclic_peptide::crosslinker::Lanthionine_Helper, including all inherited members.
| add_linker_asymmetric(core::pose::Pose &pose, core::select::residue_selector::ResidueSubset const &selection) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| add_linker_bonds_asymmetric(core::pose::Pose &pose, utility::vector1< core::Size > const &res_indices, core::Size const linker_index) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| add_linker_bonds_symmetric(core::pose::Pose &pose, core::Size const res1, core::Size const linker_index1, core::Size const linker_index2) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| add_linker_constraints_asymmetric(core::pose::Pose &pose, core::select::residue_selector::ResidueSubset const &selection) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| add_linker_constraints_symmetric(core::pose::Pose &pose, core::select::residue_selector::ResidueSubset const &selection, bool const linker_was_added) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| add_linker_symmetric(core::pose::Pose &pose, core::select::residue_selector::ResidueSubset const &selection) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| CrosslinkerMoverHelper() | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | |
| CrosslinkerMoverHelper(CrosslinkerMoverHelper const &src) | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | |
| filter_by_constraints_energy(core::pose::Pose const &pose, core::select::residue_selector::ResidueSubset const &selection, bool const symmetric, bool const linker_was_added, core::Real const &filter_multiplier) const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | protectedvirtual |
| filter_by_constraints_energy_asymmetric(core::pose::Pose const &pose, core::select::residue_selector::ResidueSubset const &selection, core::Real const &filter_multiplier) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| filter_by_constraints_energy_symmetric(core::pose::Pose const &pose, core::select::residue_selector::ResidueSubset const &selection, bool const linker_was_added, core::Real const &filter_multiplier) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| filter_by_sidechain_distance_asymmetric(core::pose::Pose const &pose, core::select::residue_selector::ResidueSubset const &selection, core::Real const &filter_multiplier) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| filter_by_sidechain_distance_symmetric(core::pose::Pose const &pose, core::select::residue_selector::ResidueSubset const &selection, core::Real const &filter_multiplier) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| get_lanthionine_residues_from_selection(core::select::residue_selector::ResidueSubset const &selection, core::pose::Pose const &pose, core::Size &dalares, core::Size &cysres) const | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | private |
| get_linker_index_asymmetric(core::pose::Pose const &pose, utility::vector1< core::Size > const &res_indices) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| get_linker_indices_symmetric(core::pose::Pose const &pose, utility::vector1< core::Size > const &res_indices, utility::vector1< core::Size > &linker_indices) const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | virtual |
| get_sidechain_indices(core::select::residue_selector::ResidueSubset const &selection, utility::vector1< core::Size > &res_indices) const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | virtual |
| helper_adds_linker_residue() const override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | inlinevirtual |
| Lanthionine_Helper() | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | |
| Lanthionine_Helper(Lanthionine_Helper const &src) | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper | |
| post_relax_round_update_steps(core::pose::Pose &pose, core::select::residue_selector::ResidueSubset const &selection, bool const whole_structure, bool const symmetric, bool const linker_was_added) const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | virtual |
| pre_relax_round_update_steps(core::pose::Pose &pose, core::select::residue_selector::ResidueSubset const &selection, bool const whole_structure, bool const symmetric, bool const linker_was_added) const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | virtual |
| provide_citation_info(basic::citation_manager::CitationCollectionList &citations) const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | virtual |
| selection_is_symmetric(core::select::residue_selector::ResidueSubset const &selection, core::pose::Pose const &pose, core::Size const expected_subunit_count) const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | virtual |
| set_symmetry(char const symm_type_in, core::Size const symm_count_in) | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | |
| symm_count() const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | inlineprotected |
| symm_count_ | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | private |
| symm_subunits_expected() const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | |
| symm_type() const | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | inlineprotected |
| symm_type_ | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | private |
| ~CrosslinkerMoverHelper() override | protocols::cyclic_peptide::crosslinker::CrosslinkerMoverHelper | |
| ~Lanthionine_Helper() override | protocols::cyclic_peptide::crosslinker::Lanthionine_Helper |
1.9.1