protocols::fldsgn::topology::DimerPairing Class Reference

#include <DimerPairing.hh>

Inheritance diagram for protocols::fldsgn::topology::DimerPairing:

Public Types
typedef core::Size	Size
typedef core::Real	Real

Public Member Functions
	~DimerPairing () override
	Automatically generated virtual destructor for class deriving directly from VirtualBase. More...
	DimerPairing (core::Size const res1, core::Size const res2, Real const dist, Real const phi, Real const theta, Real const sigma, Real const dp, core::Size const sign1, core::Size const sign2, Real const score)
core::Size	res1 () const
core::Size	res2 () const
Real	dist () const
Real	phi () const
Real	theta () const
Real	dp () const
Real	sigma () const
core::Size	sign1 () const
core::Size	sign2 () const
Real	score () const
char	orient () const
bool	valid () const
void	valid (bool const v)
bool	is_parallel (Real const phi, Real const theta)
	the pairing is parallel ? More...

Private Attributes
core::Size	res1_
core::Size	res2_
Real	dist_
Real	phi_
Real	theta_
Real	sigma_
Real	dp_
core::Size	sign1_
core::Size	sign2_
Real	score_
char	orient_
bool	valid_

Friends
std::ostream &	operator<< (std::ostream &out, const DimerPairing &dp)

Member Typedef Documentation

Real

typedef core::Real protocols::fldsgn::topology::DimerPairing::Real

Size

typedef core::Size protocols::fldsgn::topology::DimerPairing::Size

Constructor & Destructor Documentation

~DimerPairing()

protocols::fldsgn::topology::DimerPairing::~DimerPairing ( )

overridedefault

Automatically generated virtual destructor for class deriving directly from VirtualBase.

Auto-generated virtual destructor

DimerPairing()

protocols::fldsgn::topology::DimerPairing::DimerPairing	(	core::Size const	res1,
		core::Size const	res2,
		Real const	dist,
		Real const	phi,
		Real const	theta,
		Real const	sigma,
		Real const	dp,
		core::Size const	sign1,
		core::Size const	sign2,
		Real const	score
	)

References is_parallel(), orient_, phi(), and theta().

Member Function Documentation

dist()

Real protocols::fldsgn::topology::DimerPairing::dist ( ) const

inline

References dist_.

dp()

Real protocols::fldsgn::topology::DimerPairing::dp ( ) const

inline

References dp_.

is_parallel()

bool protocols::fldsgn::topology::DimerPairing::is_parallel	(	Real const	phi,
		Real const	theta
	)

the pairing is parallel ?

References phi(), and theta().

Referenced by DimerPairing().

orient()

char protocols::fldsgn::topology::DimerPairing::orient ( ) const

inline

References orient_.

Referenced by protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs().

phi()

Real protocols::fldsgn::topology::DimerPairing::phi ( ) const

inline

References phi_.

Referenced by DimerPairing(), and is_parallel().

res1()

core::Size protocols::fldsgn::topology::DimerPairing::res1 ( ) const

inline

References res1_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs(), and protocols::fldsgn::potentials::sspot::SSPairPotential::score().

res2()

core::Size protocols::fldsgn::topology::DimerPairing::res2 ( ) const

inline

References res2_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs(), and protocols::fldsgn::potentials::sspot::SSPairPotential::score().

score()

Real protocols::fldsgn::topology::DimerPairing::score ( ) const

inline

References score_.

Referenced by protocols::fldsgn::potentials::sspot::SSPairPotential::score().

sigma()

Real protocols::fldsgn::topology::DimerPairing::sigma ( ) const

inline

References sigma_.

sign1()

core::Size protocols::fldsgn::topology::DimerPairing::sign1 ( ) const

inline

References sign1_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), and protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs().

sign2()

core::Size protocols::fldsgn::topology::DimerPairing::sign2 ( ) const

inline

References sign2_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), and protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs().

theta()

Real protocols::fldsgn::topology::DimerPairing::theta ( ) const

inline

References theta_.

Referenced by DimerPairing(), and is_parallel().

valid() [1/2]

bool protocols::fldsgn::topology::DimerPairing::valid ( ) const

inline

References valid_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), and protocols::fldsgn::potentials::sspot::SSPairPotential::score().

valid() [2/2]

void protocols::fldsgn::topology::DimerPairing::valid ( bool const  v )

inline

References valid_.

Friends And Related Function Documentation

operator<<

std::ostream& operator<< ( std::ostream &  out, const DimerPairing &  dp  )

friend

Member Data Documentation

dist_

Real protocols::fldsgn::topology::DimerPairing::dist_

private

Referenced by dist().

dp_

Real protocols::fldsgn::topology::DimerPairing::dp_

private

Referenced by dp().

orient_

char protocols::fldsgn::topology::DimerPairing::orient_

private

Referenced by DimerPairing(), and orient().

phi_

Real protocols::fldsgn::topology::DimerPairing::phi_

private

Referenced by phi().

res1_

core::Size protocols::fldsgn::topology::DimerPairing::res1_

private

Referenced by res1().

res2_

core::Size protocols::fldsgn::topology::DimerPairing::res2_

private

Referenced by res2().

score_

Real protocols::fldsgn::topology::DimerPairing::score_

private

Referenced by score().

sigma_

Real protocols::fldsgn::topology::DimerPairing::sigma_

private

Referenced by sigma().

sign1_

core::Size protocols::fldsgn::topology::DimerPairing::sign1_

private

Referenced by sign1().

sign2_

core::Size protocols::fldsgn::topology::DimerPairing::sign2_

private

Referenced by sign2().

theta_

Real protocols::fldsgn::topology::DimerPairing::theta_

private

Referenced by theta().

valid_

bool protocols::fldsgn::topology::DimerPairing::valid_

private

Referenced by valid().

---

The documentation for this class was generated from the following files:

• src/protocols/fldsgn/topology/DimerPairing.hh
• src/protocols/fldsgn/topology/DimerPairing.cc