protocols::recces::sampler::rna Namespace Reference

Classes
class	MC_RNA_KIC_Sampler
class	MC_RNA_MultiSuite
class	MC_RNA_OneJump
class	MC_RNA_Sugar
class	MC_RNA_Suite

Typedefs
typedef utility::pointer::shared_ptr< MC_RNA_KIC_Sampler >	MC_RNA_KIC_SamplerOP
typedef utility::pointer::shared_ptr< MC_RNA_MultiSuite >	MC_RNA_MultiSuiteOP
typedef utility::pointer::shared_ptr< MC_RNA_OneJump >	MC_RNA_OneJumpOP
typedef utility::pointer::shared_ptr< MC_RNA_OneJump const >	MC_RNA_OneJumpCOP
typedef utility::pointer::shared_ptr< MC_RNA_Sugar >	MC_RNA_SugarOP
typedef utility::pointer::weak_ptr< MC_RNA_Sugar >	MC_RNA_SugarAP
typedef utility::pointer::shared_ptr< MC_RNA_Suite >	MC_RNA_SuiteOP

Functions
core::Real	calc_base_centroid_rmsd (core::conformation::Residue const &rsd1, core::conformation::Residue const &rsd2)

Typedef Documentation

MC_RNA_KIC_SamplerOP

typedef utility::pointer::shared_ptr< MC_RNA_KIC_Sampler > protocols::recces::sampler::rna::MC_RNA_KIC_SamplerOP

MC_RNA_MultiSuiteOP

typedef utility::pointer::shared_ptr< MC_RNA_MultiSuite > protocols::recces::sampler::rna::MC_RNA_MultiSuiteOP

MC_RNA_OneJumpCOP

typedef utility::pointer::shared_ptr< MC_RNA_OneJump const > protocols::recces::sampler::rna::MC_RNA_OneJumpCOP

MC_RNA_OneJumpOP

typedef utility::pointer::shared_ptr< MC_RNA_OneJump > protocols::recces::sampler::rna::MC_RNA_OneJumpOP

MC_RNA_SugarAP

typedef utility::pointer::weak_ptr< MC_RNA_Sugar > protocols::recces::sampler::rna::MC_RNA_SugarAP

MC_RNA_SugarOP

typedef utility::pointer::shared_ptr< MC_RNA_Sugar > protocols::recces::sampler::rna::MC_RNA_SugarOP

MC_RNA_SuiteOP

typedef utility::pointer::shared_ptr< MC_RNA_Suite > protocols::recces::sampler::rna::MC_RNA_SuiteOP

Function Documentation

calc_base_centroid_rmsd()

core::Real protocols::recces::sampler::rna::calc_base_centroid_rmsd	(	core::conformation::Residue const &	rsd1,
		core::conformation::Residue const &	rsd2
	)

References core::conformation::Residue::first_sidechain_atom(), core::conformation::Residue::is_repulsive(), core::conformation::Residue::is_virtual(), core::conformation::Residue::nheavyatoms(), and core::conformation::Residue::xyz().

Referenced by protocols::recces::sampler::rna::MC_RNA_OneJump::check_jump_in_range().