VoidsPenaltyVoxelGrid.cc File Reference

A 3D boolean array used for identifying core voxels in the VoidsPenaltyEnergy. More...

#include <core/pack/guidance_scoreterms/voids_penalty_energy/VoidsPenaltyVoxelGrid.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/Conformation.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/conformation/Residue.hh>
#include <core/pack/rotamer_set/RotamerSets.hh>
#include <core/pack/rotamer_set/RotamerSet.hh>
#include <core/id/AtomID.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/conformation/symmetry/MirrorSymmetricConformation.hh>
#include <basic/Tracer.hh>
#include <core/chemical/ResidueTypeSet.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::pack
	core::pack::guidance_scoreterms
	core::pack::guidance_scoreterms::voids_penalty_energy

Macros
#define	DEFAULT_VOXEL_SIZE   0.5
#define	DEFAULT_PADDING   1.0
#define	DEFAULT_CONE_DOTPRODUCT_CUTOFF   0.1
#define	DEFAULT_CONE_DIST_CUTOFF_SQUARED   64.0
#define	DEFAULT_CONTAINING_CONES_CUTOFF   6

Functions
static basic::Tracer	TR ("core.pack.voids_penalty_energy.VoidsPenaltyVoxelGrid")

Detailed Description

A 3D boolean array used for identifying core voxels in the VoidsPenaltyEnergy.

Author

Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m.w.edu)

Macro Definition Documentation

DEFAULT_CONE_DIST_CUTOFF_SQUARED

#define DEFAULT_CONE_DIST_CUTOFF_SQUARED   64.0

DEFAULT_CONE_DOTPRODUCT_CUTOFF

#define DEFAULT_CONE_DOTPRODUCT_CUTOFF   0.1

DEFAULT_CONTAINING_CONES_CUTOFF

#define DEFAULT_CONTAINING_CONES_CUTOFF   6

DEFAULT_PADDING

#define DEFAULT_PADDING   1.0

DEFAULT_VOXEL_SIZE

#define DEFAULT_VOXEL_SIZE   0.5

Function Documentation

TR()

static basic::Tracer TR ( "core.pack.voids_penalty_energy.VoidsPenaltyVoxelGrid"  )

static