core::fragment::rna::FragmentLibrary Class Reference

#include <FragmentLibrary.hh>

Inheritance diagram for core::fragment::rna::FragmentLibrary:

Public Member Functions
	~FragmentLibrary () override
	Automatically generated virtual destructor for class deriving directly from VirtualBase. More...
core::Real	get_fragment_torsion (core::Size const num_torsion, Size const which_frag, core::Size const offset)
TorsionSet const &	get_fragment_torsion_set (core::Size const which_frag) const
void	add_torsion (TorsionSet const &torsion_set)
void	add_torsion (FullAtomRNA_Fragments const &vall, core::Size const position, core::Size const size)
core::Size	get_align_depth () const

Private Attributes
std::vector< TorsionSet >	align_torsions_

Constructor & Destructor Documentation

~FragmentLibrary()

core::fragment::rna::FragmentLibrary::~FragmentLibrary ( )

overridedefault

Automatically generated virtual destructor for class deriving directly from VirtualBase.

Member Function Documentation

add_torsion() [1/2]

void core::fragment::rna::FragmentLibrary::add_torsion	(	FullAtomRNA_Fragments const &	vall,
		core::Size const	position,
		core::Size const	size
	)

References core::fragment::rna::FullAtomRNA_Fragments::name(), core::fragment::rna::FullAtomRNA_Fragments::non_main_chain_sugar_coords(), core::fragment::rna::TorsionSet::non_main_chain_sugar_coords, core::fragment::rna::FullAtomRNA_Fragments::non_main_chain_sugar_coords_defined(), core::fragment::rna::TorsionSet::non_main_chain_sugar_coords_defined, core::chemical::rna::NUM_RNA_TORSIONS(), core::scoring::rg, core::fragment::rna::FullAtomRNA_Fragments::secstruct(), core::fragment::rna::TorsionSet::secstruct, core::fragment::rna::TorsionSet::torsion_source_name, core::fragment::rna::FullAtomRNA_Fragments::torsions(), and core::fragment::rna::TorsionSet::torsions.

add_torsion() [2/2]

void core::fragment::rna::FragmentLibrary::add_torsion

(

TorsionSet const &

torsion_set

)

get_align_depth()

Size core::fragment::rna::FragmentLibrary::get_align_depth

(

)

const

Referenced by core::fragment::rna::analyze_for_homology().

get_fragment_torsion()

Real core::fragment::rna::FragmentLibrary::get_fragment_torsion	(	core::Size const	num_torsion,
		Size const	which_frag,
		core::Size const	offset
	)

get_fragment_torsion_set()

TorsionSet const & core::fragment::rna::FragmentLibrary::get_fragment_torsion_set

(

core::Size const

which_frag

)

const

Referenced by core::fragment::rna::analyze_for_homology().

Member Data Documentation

align_torsions_

std::vector< TorsionSet > core::fragment::rna::FragmentLibrary::align_torsions_

private

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The documentation for this class was generated from the following files:

• src/core/fragment/rna/FragmentLibrary.hh
• src/core/fragment/rna/FragmentLibrary.cc