protocols::chromophore::ChromophoreDataReader Class Reference

#include <ChromophoreDataReader.hh>

Inheritance diagram for protocols::chromophore::ChromophoreDataReader:

Public Member Functions
	ChromophoreDataReader ()
	Default constructor. More...
	~ChromophoreDataReader () override
	Destructor. More...
ChromophoreDataReaderOP	clone () const
	Clone operation: make a copy of this object, and return an owning pointer to the copy. More...
std::map< std::string, std::string >	get_residue_names_map (core::Size const &residue_number) const
void	initialize_from_file (std::string const &filename)
void	create_residue_names_maps (std::istream &instream)
bool	map_for_residue_exists (core::Size const &residue_number) const
core::Size	number_of_residues () const

Private Member Functions
void	parse_file (std::istream &infile, utility::vector1< std::tuple< std::string, std::string, core::Size > > &meaningful_file_content)
void	parse_line (std::string &file_line, std::tuple< std::string, std::string, core::Size > &parsed_line)

Private Attributes
std::map< core::Size, std::map< std::string, std::string > >	residue_name_maps_
bool	was_initialized_

Constructor & Destructor Documentation

ChromophoreDataReader()

protocols::chromophore::ChromophoreDataReader::ChromophoreDataReader

(

)

Default constructor.

~ChromophoreDataReader()

protocols::chromophore::ChromophoreDataReader::~ChromophoreDataReader ( )

overridedefault

Destructor.

Member Function Documentation

clone()

ChromophoreDataReaderOP protocols::chromophore::ChromophoreDataReader::clone

(

)

const

Clone operation: make a copy of this object, and return an owning pointer to the copy.

create_residue_names_maps()

void protocols::chromophore::ChromophoreDataReader::create_residue_names_maps

(

std::istream &

instream

)

References parse_file(), residue_name_maps_, and was_initialized_.

Referenced by initialize_from_file().

get_residue_names_map()

std::map< std::string, std::string > protocols::chromophore::ChromophoreDataReader::get_residue_names_map

(

core::Size const &

residue_number

)

const

References residue_name_maps_.

initialize_from_file()

void protocols::chromophore::ChromophoreDataReader::initialize_from_file

(

std::string const &

filename

)

References create_residue_names_maps(), protocols::abinitio::filename(), and was_initialized_.

map_for_residue_exists()

bool protocols::chromophore::ChromophoreDataReader::map_for_residue_exists

(

core::Size const &

residue_number

)

const

References number_of_residues(), and residue_name_maps_.

number_of_residues()

core::Size protocols::chromophore::ChromophoreDataReader::number_of_residues

(

)

const

References residue_name_maps_.

Referenced by map_for_residue_exists().

parse_file()

void protocols::chromophore::ChromophoreDataReader::parse_file ( std::istream &  infile, utility::vector1< std::tuple< std::string, std::string, core::Size > > &  meaningful_file_content  )

private

References parse_line().

Referenced by create_residue_names_maps().

parse_line()

void protocols::chromophore::ChromophoreDataReader::parse_line ( std::string &  file_line, std::tuple< std::string, std::string, core::Size > &  parsed_line  )

private

Referenced by parse_file().

Member Data Documentation

residue_name_maps_

std::map< core::Size, std::map <std::string, std::string> > protocols::chromophore::ChromophoreDataReader::residue_name_maps_

private

Referenced by create_residue_names_maps(), get_residue_names_map(), map_for_residue_exists(), and number_of_residues().

was_initialized_

bool protocols::chromophore::ChromophoreDataReader::was_initialized_

private

Referenced by create_residue_names_maps(), and initialize_from_file().

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The documentation for this class was generated from the following files:

• src/protocols/chromophore/ChromophoreDataReader.hh
• src/protocols/chromophore/ChromophoreDataReader.cc