#include <ResidueNeighborList.hh>

Inheritance diagram for core::scoring::ResiduePairNeighborList:

Public Types
typedef basic::datacache::CacheableData	parent

typedef basic::datacache::CacheableDataOP	CacheableDataOP

typedef basic::datacache::CacheableDataCOP	CacheableDataCOP

Public Member Functions
	ResiduePairNeighborList ()

	~ResiduePairNeighborList () override

CacheableDataOP	clone () const override

void	initialize_from_residues (Real vvd2, Real hvd2, Real hhd2, conformation::Residue const &r1, conformation::Residue const &r2, etable::count_pair::CountPairFunctionCOP cpfxn)

void	initialize_from_residues (Real vvd2, Real hvd2, Real hhd2, conformation::Residue const &r1, conformation::Residue const &r2, etable::count_pair::CountPairFunctionCOP cpfxn, std::map< core::Size, core::Size > const &r1_map, std::map< core::Size, core::Size > const &r2_map)

utility::vector1< SmallAtNb > const &	atom_neighbors () const

Private Attributes
utility::vector1< SmallAtNb >	atom_neighbors_

Member Typedef Documentation

◆ CacheableDataCOP

typedef basic::datacache::CacheableDataCOP core::scoring::ResiduePairNeighborList::CacheableDataCOP

◆ CacheableDataOP

typedef basic::datacache::CacheableDataOP core::scoring::ResiduePairNeighborList::CacheableDataOP

◆ parent

typedef basic::datacache::CacheableData core::scoring::ResiduePairNeighborList::parent

Constructor & Destructor Documentation

◆ ResiduePairNeighborList()

core::scoring::ResiduePairNeighborList::ResiduePairNeighborList ( )

default

◆ ~ResiduePairNeighborList()

core::scoring::ResiduePairNeighborList::~ResiduePairNeighborList ( )

overridedefault

Member Function Documentation

◆ atom_neighbors()

utility::vector1< SmallAtNb > const& core::scoring::ResiduePairNeighborList::atom_neighbors ( ) const

inline

References atom_neighbors_.

Referenced by core::scoring::etable::BaseEtableEnergy< Derived >::eval_residue_pair_derivatives(), and core::scoring::etable::BaseEtableEnergy< Derived >::residue_pair_energy_ext().

◆ clone()

ResiduePairNeighborList::CacheableDataOP core::scoring::ResiduePairNeighborList::clone ( ) const

override

◆ initialize_from_residues() [1/2]

void core::scoring::ResiduePairNeighborList::initialize_from_residues	(	Real	vvd2,
		Real	hvd2,
		Real	hhd2,
		conformation::Residue const &	r1,
		conformation::Residue const &	r2,
		etable::count_pair::CountPairFunctionCOP	cpfxn
	)

References atom_neighbors_, protocols::hybridization::r1, and protocols::hybridization::r2.

◆ initialize_from_residues() [2/2]

void core::scoring::ResiduePairNeighborList::initialize_from_residues	(	Real	vvd2,
		Real	hvd2,
		Real	hhd2,
		conformation::Residue const &	r1,
		conformation::Residue const &	r2,
		etable::count_pair::CountPairFunctionCOP	cpfxn,
		std::map< core::Size, core::Size > const &	r1_map,
		std::map< core::Size, core::Size > const &	r2_map
	)

References atom_neighbors_, protocols::hybridization::r1, and protocols::hybridization::r2.

Member Data Documentation

◆ atom_neighbors_

utility::vector1< SmallAtNb > core::scoring::ResiduePairNeighborList::atom_neighbors_

private

Referenced by atom_neighbors(), and initialize_from_residues().

The documentation for this class was generated from the following files:

src/core/scoring/ResidueNeighborList.hh
src/core/scoring/ResidueNeighborList.cc

Public Types

Public Member Functions

Private Attributes