This is the complete list of members for protocols::ligand_evolution::EvolutionOptions, including all inherited members.

check_factories()	protocols::ligand_evolution::EvolutionOptions	private
check_pop_init()	protocols::ligand_evolution::EvolutionOptions	private
check_scorer_setup()	protocols::ligand_evolution::EvolutionOptions	private
check_selectors()	protocols::ligand_evolution::EvolutionOptions	private
check_validity()	protocols::ligand_evolution::EvolutionOptions	private
error_counter_	protocols::ligand_evolution::EvolutionOptions	private
evolution_protocol_defined_	protocols::ligand_evolution::EvolutionOptions	private
EvolutionOptions()	protocols::ligand_evolution::EvolutionOptions
EvolutionOptions(std::string const &path_to_option_file)	protocols::ligand_evolution::EvolutionOptions	explicit
external_scoring_	protocols::ligand_evolution::EvolutionOptions	private
factories_defined_	protocols::ligand_evolution::EvolutionOptions	private
factory_options_	protocols::ligand_evolution::EvolutionOptions	private
generations_	protocols::ligand_evolution::EvolutionOptions	private
get_external_scoring() const	protocols::ligand_evolution::EvolutionOptions
get_factory_names() const	protocols::ligand_evolution::EvolutionOptions
get_factory_parameter(std::string const &name, std::string const &parameter) const	protocols::ligand_evolution::EvolutionOptions
get_factory_type(std::string const &name) const	protocols::ligand_evolution::EvolutionOptions
get_ligand_chain() const	protocols::ligand_evolution::EvolutionOptions
get_main_scfx() const	protocols::ligand_evolution::EvolutionOptions
get_main_selector() const	protocols::ligand_evolution::EvolutionOptions
get_main_term() const	protocols::ligand_evolution::EvolutionOptions
get_max_generations() const	protocols::ligand_evolution::EvolutionOptions
get_n_scoring_runs() const	protocols::ligand_evolution::EvolutionOptions
get_path_score_memory() const	protocols::ligand_evolution::EvolutionOptions
get_path_to_external_smiles() const	protocols::ligand_evolution::EvolutionOptions
get_path_to_reactions() const	protocols::ligand_evolution::EvolutionOptions
get_path_to_reagents() const	protocols::ligand_evolution::EvolutionOptions
get_pop_init_options() const	protocols::ligand_evolution::EvolutionOptions
get_population_supported_size() const	protocols::ligand_evolution::EvolutionOptions
get_pose_dir_path() const	protocols::ligand_evolution::EvolutionOptions
get_pose_from_stream()	protocols::ligand_evolution::EvolutionOptions
get_protocol_path() const	protocols::ligand_evolution::EvolutionOptions
get_selector_factory_links() const	protocols::ligand_evolution::EvolutionOptions
get_selector_names() const	protocols::ligand_evolution::EvolutionOptions
get_selector_parameter(std::string const &name, std::string const &parameter) const	protocols::ligand_evolution::EvolutionOptions
get_selector_type(std::string const &name) const	protocols::ligand_evolution::EvolutionOptions
get_similarity_penalty() const	protocols::ligand_evolution::EvolutionOptions
get_similarity_penalty_threshold() const	protocols::ligand_evolution::EvolutionOptions
get_start_xyz() const	protocols::ligand_evolution::EvolutionOptions
ligand_chain_	protocols::ligand_evolution::EvolutionOptions	private
main_score_term_	protocols::ligand_evolution::EvolutionOptions	private
main_selector_	protocols::ligand_evolution::EvolutionOptions	private
parse_cmdline()	protocols::ligand_evolution::EvolutionOptions	private
parse_option_file(std::string const &option_file)	protocols::ligand_evolution::EvolutionOptions	private
path_to_external_smiles_	protocols::ligand_evolution::EvolutionOptions	private
path_to_reactions_	protocols::ligand_evolution::EvolutionOptions	private
path_to_reagents_	protocols::ligand_evolution::EvolutionOptions	private
path_to_score_memory_	protocols::ligand_evolution::EvolutionOptions	private
pop_init_options_	protocols::ligand_evolution::EvolutionOptions	private
pose_dump_directory_	protocols::ligand_evolution::EvolutionOptions	private
pose_stream_	protocols::ligand_evolution::EvolutionOptions	private
protocol_path_	protocols::ligand_evolution::EvolutionOptions	private
score_runs_	protocols::ligand_evolution::EvolutionOptions	private
scoring_function_	protocols::ligand_evolution::EvolutionOptions	private
selector_factory_links_	protocols::ligand_evolution::EvolutionOptions	private
selector_options_	protocols::ligand_evolution::EvolutionOptions	private
selectors_defined_	protocols::ligand_evolution::EvolutionOptions	private
similarity_penalty_	protocols::ligand_evolution::EvolutionOptions	private
similarity_penalty_threshold_	protocols::ligand_evolution::EvolutionOptions	private
supported_population_size_	protocols::ligand_evolution::EvolutionOptions	private
xyz_	protocols::ligand_evolution::EvolutionOptions	private