PTMPredictionTensorflowProtocol.cc File Reference

A class for predicting post-translational modifications using neural networks. More...

#include <protocols/ptm_prediction/PTMPredictionTensorflowProtocol.hh>
#include <utility/pointer/owning_ptr.hh>
#include <basic/database/open.hh>
#include <basic/Tracer.hh>
#include <basic/tensorflow_manager/RosettaTensorflowManager.hh>
#include <basic/tensorflow_manager/RosettaTensorflowSessionContainer.hh>
#include <basic/tensorflow_manager/RosettaTensorflowSessionContainer.tmpl.hh>
#include <basic/tensorflow_manager/RosettaTensorflowTensorContainer.tmpl.hh>
#include <core/pose/Pose.hh>
#include <core/import_pose/import_pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/sasa/SasaCalc.hh>
#include <core/conformation/Residue.hh>
#include <protocols/moves/DsspMover.hh>
#include <protocols/ptm_prediction/PTMPredictionMetric.hh>
#include <chrono>
#include <iostream>
#include <fstream>
#include <iomanip>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ptm_prediction

Functions
static basic::Tracer	TR ("protocols.ptm_prediction.PTMPredictionTensorflowProtocol")

Detailed Description

A class for predicting post-translational modifications using neural networks.

A class for predicting post-translational modifications using a Neural Net.

Author

Moritz Ertelt (morit.nosp@m.z.er.nosp@m.telt@.nosp@m.goog.nosp@m.lemai.nosp@m.l.co.nosp@m.m)

Function Documentation

TR()

static basic::Tracer TR ( "protocols.ptm_prediction.PTMPredictionTensorflowProtocol"  )

static