core::chemical::RerootRestypeVisitor Class Reference

Inheritance diagram for core::chemical::RerootRestypeVisitor:

Public Member Functions
	RerootRestypeVisitor (VdTreeatomMap &map, core::chemical::VD root, core::chemical::MutableResidueType const &restype)
template<class Vertex , class Graph >
void	initialize_vertex (Vertex u, const Graph &)
template<class Vertex , class Graph >
void	start_vertex (Vertex u, const Graph &)
template<class Edge , class Graph >
void	tree_edge (Edge u, const Graph &g)

Private Attributes
core::chemical::VD	root_
VdTreeatomMap &	treeatom_map_
core::chemical::MutableResidueType const &	restype_

Constructor & Destructor Documentation

RerootRestypeVisitor()

core::chemical::RerootRestypeVisitor::RerootRestypeVisitor ( VdTreeatomMap &  map, core::chemical::VD  root, core::chemical::MutableResidueType const &  restype  )

inline

Member Function Documentation

initialize_vertex()

template<class Vertex , class Graph >

void core::chemical::RerootRestypeVisitor::initialize_vertex ( Vertex  u, const Graph &    )

inline

References core::chemical::MutableResidueType::atom(), core::chemical::MutableResidueType::atom_index(), core::chemical::Atom::ideal_xyz(), restype_, treeatom_map_, and protocols::hybridization::u.

start_vertex()

template<class Vertex , class Graph >

void core::chemical::RerootRestypeVisitor::start_vertex ( Vertex  u, const Graph &    )

inline

References core::chemical::MutableResidueType::atom_name(), core::chemical::MutableResidueType::has(), core::chemical::ResidueTypeBase::name(), restype_, root_, core::chemical::TR(), and protocols::hybridization::u.

tree_edge()

template<class Edge , class Graph >

void core::chemical::RerootRestypeVisitor::tree_edge ( Edge  u, const Graph &  g  )

inline

References treeatom_map_, and protocols::hybridization::u.

Member Data Documentation

restype_

core::chemical::MutableResidueType const& core::chemical::RerootRestypeVisitor::restype_

private

Referenced by initialize_vertex(), and start_vertex().

root_

core::chemical::VD core::chemical::RerootRestypeVisitor::root_

private

Referenced by start_vertex().

treeatom_map_

VdTreeatomMap& core::chemical::RerootRestypeVisitor::treeatom_map_

private

Referenced by initialize_vertex(), and tree_edge().

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The documentation for this class was generated from the following file:

• src/core/chemical/icoor_support.cc