MPResidueLipophilicityEnergy.cc File Reference

Fullatom Smoothed Membrane Environment Energy. More...

#include <core/energy_methods/MPResidueLipophilicityEnergy.hh>
#include <core/energy_methods/MPResidueLipophilicityEnergyCreator.hh>
#include <core/chemical/AA.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <core/id/AtomID.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/TwelveANeighborGraph.hh>
#include <core/scoring/ContextGraphTypes.hh>
#include <utility/graph/Graph.hh>
#include <core/pose/Pose.hh>
#include <utility/string_util.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <basic/Tracer.hh>
#include <basic/database/open.hh>
#include <boost/lexical_cast.hpp>
#include <map>
#include <math.h>
#include <set>

Namespaces
	core
	A class for reading in the atom type properties.
	core::energy_methods

Functions
static basic::Tracer	TR ("core.energy_methods.MPResidueLipophilicityEnergy")

Detailed Description

Fullatom Smoothed Membrane Environment Energy.

residue speicific enrgy by membrane depth, according to the Elazar hydrophobicity scale @FlesihmanLab. Last Modified: 4/4/16

Author

Jonathan Weinstein (jonat.nosp@m.han..nosp@m.weins.nosp@m.tein.nosp@m.@weiz.nosp@m.mann.nosp@m..ac.i.nosp@m.l)

Assaf Elazar

Sarel Fleishman

Function Documentation

TR()

static basic::Tracer TR ( "core.energy_methods.MPResidueLipophilicityEnergy"  )

static